Parental gene:

UBE2H, ENSPPYG00000017997

Aliases:None
Description:ubiquitin-conjugating enzyme E2H [Source:HGNC Symbol;Acc:12484]
Organism:Orangutan (Pongo abelii)
Coordinates:7:126748123..126870023(-)


>ENSPPYG00000017997
ATGTCATCTCCCAGTCCGGGCAAGAGGCGGATGGACACGGACGTGGTCAAGCTCATTGAGAGTAAACATGAGGTTACGAT
CCTGGGAGGACTCAATGAATTTGTAGTGAAGTTTTATGGACCACAAGGAACACCATATGAAGGCGGAGTATGGAAAGTTA
GAGTGGACCTACCTGATAAATACCCTTTCAAATCTCCATCTATAGGATTCATGAATAAAATTTTCCATCCCAACATTGAT
GAAGCGTCAGGAACTGTGTGTCTAGATGTAATTAATCAAACTTGGACAGCTCTCTATGATCTTACCAATATATTTGAGTC
CTTCCTGCCTCAGTTGTTGGCCTATCCTAACCCCATAGATCCTCTCAATGGTGACGCTGCAGCCATGTACCTCCACCGAC
CAGAAGAATACAAGCAGAAAATTAAAGAGTACATCCAGAAATACGCCACGGAGGAGGCGCTGAAAGAACAGGAAGAGGGT
ACCGGGGACAGCTCATCGGAGAGCTCTATGTCTGACTTTTCCGAAGATGAGGCCCAGGATATGGAGTTGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 143 .53 RPM
SRP007412_cerebellum 138 .14 RPM
SRP007412_heart 75 .32 RPM
SRP007412_kidney 100 .73 RPM
SRP007412_liver 61 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003605 ortholog_one2one 2 retrogenes
retro_chof_1862, retro_chof_1932,
Callithrix jacchus ENSCJAG00000010520 ortholog_one2one 1 retrogene
retro_cjac_1081,
Homo sapiens ENSG00000186591 ortholog_one2one 1 retrogene
retro_hsap_3977,
Nomascus leucogenys ENSNLEG00000012685 ortholog_one2one 1 retrogene
retro_nleu_2037,
Rattus norvegicus ENSRNOG00000048205 ortholog_one2one 2 retrogenes
retro_rnor_2188, retro_rnor_2266,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3271 87.18 63.93
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Download FASTA sequences of all ENSPPYG00000017997 retrocopies