Parental gene:

PES1, ENSCJAG00000010617

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:193398742..193442082(-)


>ENSCJAG00000010617
ATGGGAGGCCTTGAGAAGAAGAAGTATGAACGAGGCTCAGCCACCAACTACATCACCCGGAACAAAGCCCGGAAGAAGCT
CCAGCTGAGCCTGGCTGACTTTAGGCGGCTGTGCATTCTGAAGGGCATTTATCCCCACGAACCCAAACACAAGAAGAAGG
TTAACAAGGGTTCTACAGCGGCCCGAACTTTTTACCTTATCAAAGACATCAGGTTTCTCCTCCATGAACCCATCGTCAAC
AAGTTCCGGGAATACAAGGTGTTCGTCCGGAAGCTCCGGAAGGCCTATGGGAAGAGCGAGTGGAACACCGTAGAGCGTCT
AAAGGACAATAAGCCCAACTACAAACTTGACCACATCATCAAGGAACGGTACCCCACATTCATTGATGCCCTGCGCGACC
TGGACGACGCCCTCTCCATGTGCTTCCTCTTTTCCACCTTCCCACGGACTGGCAAGTGTCACGTGCAGACCATTCAGCTG
TGCCGCCGGCTCACCGTGGAGTTCATGCACTACATCATTGCCTCCCGTGCCCTGCGCAAGGTCTTCCTGTCCATCAAAGG
CATTTACTACCAGGCCGAGGTGCTGGGGCAGCCCATCGTGTGGATCACTCCCTATGCCTTCTCCCATGACCACCCAACAG
ACGTGGACTACAGGGTCATGGCCACCTTCACTGAGTTCTACACCACCCTGCTGGGCTTCGTCAACTTCCGCCTCTACCAG
TCGCTCAACCTCCACTACCCCCCAAAGCTCGAGGGACAGGCCCAAGCAGAGGTGAAGGCCAGTGAGGACACCTACGCGCT
GGACTCTGAGAGCTCTATGGAGAAACTGGCGGCCCTCAGTGCCAGCCTGGCTCGCGTGGTGGTGCCTGCCATGGAAGAGG
AGGCCGAGGTGGATGAGTTTCCTGCTGATGGGGAGATGTCGGCACAAGAGGAAGACCGCAGGAAGGAGCTGGAGGCGCAG
GAGAAGCACAAGAAGCTTTTTGAGGGCCTGAAGTTCTTCCTGAACCGAGAGGTGCCCCGCGAGGCCCTGGCCTTCATCAT
CAGGAGTTTTGGGGGGGAAGTGTCCTGGGACAAGTCTTTGTGCATTGGGGCCACCTACGATGTCACGGACTCCCGCATCA
CCCACCAGATTGTCGACCGGCCTGGGCAGCAGACCCCTGTCATAGGCAGGTGCTACGTGCAGCCCCAGTGGGTGTTTGAC
TCAGTGAACGCTAGGCTCCTCCTCCCCGTGGCAGAGTACTTCCCTGGGGTGCAGCTCCCCCCACACCTTTCACCCTTTGT
GACTGAGAAGGAAGGAGATTATGTCCCACCTGAGAAGCTGAAGCTGCTGGCTCTGCAGCGGGGAGAAGACCCAGGTGAGC
AGGATAACTCAGCAGAAGAACATACTGAGTTGTCATCTGGGCTGTGGGGAGGTGCCAGAGAGGGCCACAGTTGGGACAGC
CCTGAACTGCCCATGGCTGAAGGCGGCAGGGTCAGAGAGGATGGGGCCCGGCTGGCAGCCCTGGAGGAGCAGAGGATGGA
GGGGAAGAAGCCCAGGGTGATGGCAGGCACCTTGAAACTGGAGGATAAGCAGCGGCTGGCCCAGGAGGAAGAGAGCGAGG
CCAAGCGCTTGGCCATCATGATGATGAAGAAGCGGGAGAAGTACCTGTACCAGAAGATCATGTTTGGCAAGAGGCGAAAA
ATCCGGGAGGCCAACAAGCTGGCAGAGAAACGGAAAGCCCACGATCAGGCGGTAAAGTCTGAGAAGAAGGCCAAGAAGGC
AAGGCCGGAGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 18 .66 RPM
SRP051959_skeletal_muscle 23 .15 RPM
SRP051959_lymph_node 17 .42 RPM
SRP051959_lung 17 .10 RPM
SRP051959_liver 15 .60 RPM
SRP051959_kidney 23 .10 RPM
SRP051959_heart 14 .54 RPM
SRP051959_colon 16 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000003565 possible_ortholog 1 retrogene
retro_cpor_986,
Homo sapiens ENSG00000100029 ortholog_one2one 1 retrogene
retro_hsap_4133,
Otolemur garnettii ENSOGAG00000005804 ortholog_one2one 1 retrogene
retro_ogar_1719,
Pongo abelii ENSPPYG00000011716 ortholog_one2one 1 retrogene
retro_pabe_3471,
Pan troglodytes ENSPTRG00000014251 ortholog_one2one 2 retrogenes
retro_ptro_2018, retro_ptro_2809,
Rattus norvegicus ENSRNOG00000004515 possible_ortholog 2 retrogenes
retro_rnor_2953, retro_rnor_824,
Tupaia belangeri ENSTBEG00000009825 ortholog_one2one 1 retrogene
retro_tbel_1000,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3182 94.80 74.58
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Download FASTA sequences of all ENSCJAG00000010617 retrocopies