Parental gene: | RPL10, ENSCJAG00000011822 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | X:140824469..140826939(+) |
>ENSCJAG00000011822
ATGGGCCGCCGCCCCGCCCGTTGTTACCGATATTGTAAGAACAAGCCGTACCCAAAGTCCCGCTTCTGCCGAGGTGTCCC
TGACGCCAAAATTCGCATCTTTGACCTGGGGCGGAAGAAGGCAAAAGTGGATGAGTTTCCACTCTGTGGCCACATGGTAT
CGGATGAATATGAGCAGCTCTCCTCTGAAGCCCTGGAGGCTGCCCGAATTTGTGCCAATAAGTACATGGTGAAAAGTTGT
GGCAAAGATGGCTTTCATATCCGAGTGCGGCTCCATCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGG
GGCTGACAGGCTCCAAACAGGCATGCGAGGTGCCTTTGGAAAGCCCCAGGGCACTGTGGCCAGGGTTCACATTGGCCAAG
TGATCATGTCCATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGAGGCCCTGCGCAGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATCCACATCTCAAAGAAGTGGGGCTTCACCAAGTTCAATGCCGATGAATTTGAAGACATGGTGGCTGA
GAAGCGGCTCATCCCAGATGGCTGTGGGGTTAAGTACATCCCCAATCGTGGCCCTCTGGACAAGTGGCGGGCCCTGCACT
CATGA
ATGGGCCGCCGCCCCGCCCGTTGTTACCGATATTGTAAGAACAAGCCGTACCCAAAGTCCCGCTTCTGCCGAGGTGTCCC
TGACGCCAAAATTCGCATCTTTGACCTGGGGCGGAAGAAGGCAAAAGTGGATGAGTTTCCACTCTGTGGCCACATGGTAT
CGGATGAATATGAGCAGCTCTCCTCTGAAGCCCTGGAGGCTGCCCGAATTTGTGCCAATAAGTACATGGTGAAAAGTTGT
GGCAAAGATGGCTTTCATATCCGAGTGCGGCTCCATCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGG
GGCTGACAGGCTCCAAACAGGCATGCGAGGTGCCTTTGGAAAGCCCCAGGGCACTGTGGCCAGGGTTCACATTGGCCAAG
TGATCATGTCCATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGAGGCCCTGCGCAGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATCCACATCTCAAAGAAGTGGGGCTTCACCAAGTTCAATGCCGATGAATTTGAAGACATGGTGGCTGA
GAAGCGGCTCATCCCAGATGGCTGTGGGGTTAAGTACATCCCCAATCGTGGCCCTCTGGACAAGTGGCGGGCCCTGCACT
CATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 320 .00 RPM |
| SRP051959_skeletal_muscle | 304 .88 RPM |
| SRP051959_lymph_node | 334 .37 RPM |
| SRP051959_lung | 185 .19 RPM |
| SRP051959_liver | 287 .35 RPM |
| SRP051959_kidney | 206 .53 RPM |
| SRP051959_heart | 175 .81 RPM |
| SRP051959_colon | 224 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000011395 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013163 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008731 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000015919 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000027149 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_61 | 99.07 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_156 | 99.07 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_174 | 94.39 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_260 | 96.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_277 | 95.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011822 retrocopies