Parental gene:

RPL10, ENSOCUG00000015919

Aliases:None
Description:ribosomal protein L10 (RPL10), mRNA [Source:RefSeq mRNA;Acc:NM_001171374]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:AAGW02082198:2019..9344(-)


>ENSOCUG00000015919
ATGGGCCGCCGCCCCGCCCGGTGTTACCGGTATTGTAAGAACAAGCCGTACCCTAAGTCTCGCTTCTGCCGAGGTGTCCC
TGATGCCAAGATCCGTATCTTTGATCTGGGCCGGAAGAAGGCAAAAGTGGATGAGTTTCCACTGTGTGGCCACATGGTGT
CGGACGAATATGAGCAGCTCTCTTCTGAAGCCCTGGAGGCTGCCCGTATTTGTGCCAACAAATACATGGTAAAAAGCTGT
GGCAAAGATGGCTTTCATATCCGAGTGCGGCTCCACCCCTTCCATGTCATCCGAATCAACAAGATGTTGTCCTGTGCTGG
TGCTGACAGGCTGCAGACAGGTATGCGGGGTGCTTTTGGAAAGCCCCAAGGCACAGTAGCCAGAGTTCACATTGGCCAAG
TCATCATGTCCATCCGCACCAAGCTGCAGAATAAGGAACATGTGGTTGAGGCCCTACGCAGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATCCACATCTCAAAGAAGTGGGGCTTTACCAAGTTTAACGCGGATGAATTTGAAGACATGGTGGCGGA
GAAGCGGCTCATCCCGGACGGCTGCGGGGTCAAGTACATCCCCAATCGTGGCCCCCTGGACAAGTGGCGGGCCCTCCACT
CATGA

Library Parental gene expression (RPM)
SRP017611_brain 151 .44 RPM
SRP017611_kidney 394 .58 RPM
SRP017611_liver 229 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011822 ortholog_one2many 5 retrogenes
retro_cjac_156, retro_cjac_174, retro_cjac_260, retro_cjac_277, retro_cjac_61,
Felis catus ENSFCAG00000011395 ortholog_one2many 1 retrogene
retro_fcat_81,
Macropus eugenii ENSMEUG00000013163 possible_ortholog 3 retrogenes
retro_meug_1839, retro_meug_5, retro_meug_547,
Monodelphis domestica ENSMODG00000008731 possible_ortholog 2 retrogenes
retro_mdom_177, retro_mdom_829,
Rattus norvegicus ENSRNOG00000027149 ortholog_one2many 5 retrogenes
retro_rnor_1007, retro_rnor_1090, retro_rnor_270, retro_rnor_2998, retro_rnor_482,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_107 98.60 100.00
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2. retro_ocun_147 96.26 100.00
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Download FASTA sequences of all ENSOCUG00000015919 retrocopies