Parental gene: | MTRF1L, ENSCJAG00000012787 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:153924954..153940607(-) |
>ENSCJAG00000012787
ATGCAGTCCAGTCTTCTGTGGTGTGCTGCCCGGTTGCTGTGGCCCCGCGGGGCCGTTGCCGCAGCCCGCCGGTCCCTGAG
CGGCGGTAGCCGGCCGCTGGAGGAGCTGTTCTCCCAGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCCAGGCGGGATCTG
AAGCTCATTTGAAGGTCAGGAGGCCCGAGTTGGTGGCGGTAGTCAAACTACTGAATGAAAAGGAGCAGGAGCTGCGGGAG
ACCGAGCACTTGCTGCACGATGAAAATGAAGATTTAAGGAAACTGGCAGAGAATGAAATAACCTTGTGTCAAAAAGAAAT
AACTCAGTTGAAACATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAACAGATGAAAATGATTTGATCCTGGAAGTAA
CTGCAGGTGTTGGAGGTCAGGAGGCAATGTTGTTTACTTCAGAGATGTTTGATATGTATCAGCGATATGCTGCATTTAAA
AGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGAAATAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTC
AGAAGCCTATAGGCACATGAAATTTGAAGGAGGTGTGCACAGAGTACAAAGGGTGCCAAAGACAGAAAAGCAAGGCCGCA
TCCATACTAGCACCATGACTGTCGCAATATTACCCCAACCCACTGAGATTAATCTGGTGATTAATCCAAAAGATTTGAGA
ATTGACACTAAGCGAGCCAGTGGAGCTGGGGGGCAGCATGTAAATACAACAGACAGTGCTGTCCGAATAGTTCATCTTCC
AACAGGTGTTGTTTCTGAATGTCAACAAGAGAGATCTCAACTGAAAAATAAAGAGCTGGCTATGAAAAAGTTACGTGCAA
AACTGTACAGCATGCATCTAGAAGAAGAAACAAATAAGAGAGACAATGCTAGAAAAATTCAGATTGGAAGTAAAGGAAGA
TCCGAGAAAATAAGAACATATAATTTTCCACAGAACCGGGTCACAGATCACAGAATAAGCAAGTCACTGCATGATCTTCA
AACTTTTATGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCATTGAAGGAATATGCTGATTATGAATCTTTAGTAG
AAATTATTTCCCAAACAGTTTAA
ATGCAGTCCAGTCTTCTGTGGTGTGCTGCCCGGTTGCTGTGGCCCCGCGGGGCCGTTGCCGCAGCCCGCCGGTCCCTGAG
CGGCGGTAGCCGGCCGCTGGAGGAGCTGTTCTCCCAGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCCAGGCGGGATCTG
AAGCTCATTTGAAGGTCAGGAGGCCCGAGTTGGTGGCGGTAGTCAAACTACTGAATGAAAAGGAGCAGGAGCTGCGGGAG
ACCGAGCACTTGCTGCACGATGAAAATGAAGATTTAAGGAAACTGGCAGAGAATGAAATAACCTTGTGTCAAAAAGAAAT
AACTCAGTTGAAACATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAACAGATGAAAATGATTTGATCCTGGAAGTAA
CTGCAGGTGTTGGAGGTCAGGAGGCAATGTTGTTTACTTCAGAGATGTTTGATATGTATCAGCGATATGCTGCATTTAAA
AGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGAAATAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTC
AGAAGCCTATAGGCACATGAAATTTGAAGGAGGTGTGCACAGAGTACAAAGGGTGCCAAAGACAGAAAAGCAAGGCCGCA
TCCATACTAGCACCATGACTGTCGCAATATTACCCCAACCCACTGAGATTAATCTGGTGATTAATCCAAAAGATTTGAGA
ATTGACACTAAGCGAGCCAGTGGAGCTGGGGGGCAGCATGTAAATACAACAGACAGTGCTGTCCGAATAGTTCATCTTCC
AACAGGTGTTGTTTCTGAATGTCAACAAGAGAGATCTCAACTGAAAAATAAAGAGCTGGCTATGAAAAAGTTACGTGCAA
AACTGTACAGCATGCATCTAGAAGAAGAAACAAATAAGAGAGACAATGCTAGAAAAATTCAGATTGGAAGTAAAGGAAGA
TCCGAGAAAATAAGAACATATAATTTTCCACAGAACCGGGTCACAGATCACAGAATAAGCAAGTCACTGCATGATCTTCA
AACTTTTATGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCATTGAAGGAATATGCTGATTATGAATCTTTAGTAG
AAATTATTTCCCAAACAGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .58 RPM |
| SRP051959_skeletal_muscle | 5 .68 RPM |
| SRP051959_lymph_node | 9 .98 RPM |
| SRP051959_lung | 6 .91 RPM |
| SRP051959_liver | 5 .42 RPM |
| SRP051959_kidney | 9 .03 RPM |
| SRP051959_heart | 6 .79 RPM |
| SRP051959_colon | 6 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000112031 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017997 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009980 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003131 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1305 | 93.05 | 67.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012787 retrocopies