Parental gene: | EPS15L1, ENSCJAG00000013985 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:15349449..15473821(-) |
>ENSCJAG00000013985
ATGGCGGCGCCGCTTATCCCCCTCTCCCAGCAGATTCCCACTGGAAATTCCTTGTATGAATCTTATTACAAGCAGGTTGA
TCCGGCATACACAGGGAGGGTGGGGGCGAGTGAAGCTGCGCTTTTTCTAAAGAAGTCTGGCCTCTCGGACATTACCCTTG
GGAAGATATGGGACTTGGCCGACCCAGAAGGTAAAGGGTTCTTGGACAAACAGGGTTTCTATGTTGCACTGAGACTGGTG
GCCTGTGCACAGAGTGGCCATGAGGTGACCTTGAGCAATCTGAATTTGAATATGCCGCCGCCTAAATTTCACGACACCAG
CAGCCCTCTGATGGTCACGCCGCCCTCTGCAGAGGCCCACTGGGCTGTGAGGGTGGAGGAAAAGGCCAAATTTGATGGAA
TTTTTGAAAGCCTCTTACCCATCAATGGTTTGCTCTCCGGAGACAAGGTCAAGCCGGTCCTCATGAACTCAAAACTGCCT
CTTGATGTCCTGGGCCGGGTCTGGGACCTCAGTGACATCGACAAGGATGGGCACTTGGACCGAGATGAGTTCGCTGTGGC
CATGCACTTGGTGTACCGAGCCCTCGAGAAGGAGCCCGTGCCCTCCGCCCTGCCTCCGTCCCTCATCCCACCCTCCAAGA
GAAAGAAGACTGTGTTCCCTGGCGCCGTCCCTGTCCTGCCCGCCAGCCCCCCTCCAAAAGACAGCCTCCGCTCCACGCCA
TCCCATGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAACAGGTATGGAGCC
CTCAGNNNNCTGGGTGGTGCCCGTGGCTGACAAGATGCGATTTGATGAGATATTCCTGAAGACCGACTTGGACCTGGACG
GCTATGTGAGTGGCCAGGAGGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCAGAACCTTCTAGCACACATATGGGCC
CTGGCCGATACGAGGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTATGTATTTCATTCAGCAGAAGGTCAG
TAAAGGCATCGACCCCCCTCAAGTCCTCTCGCCGGACATGGTCCCGCCCTCGGAGAGAGGCACACCCGGCCCGGACAGTT
CGGGCTCTCTCGGCTCCGGGGAGTTTACTGGCGTGAAGGAGCTCGATGACATCAGTCAAGAGATCGCCCAGTTACAAAGG
GAGAAATATTCACTGGAACAAGACATTAGAGAAAAGGAAGAGGCAATAAGACAGAAGACCAGCGAGGTACAGGAATTACA
AAATGACCTGGACCGGGAAACAAGCAGTTTGCAGGAGCTTGAGGCTCAGAAACAAGATGCTCAAGACCGCCTGGACGAGA
TGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTGCGGCAGAAGTGCCAGGACGAGACGCAGATGATTTCA
TCACTGAAAACGCAAATCCAGTCTCAGGAATCTGACTTAAAGTCCCAGGAAGATGATCTGAACCGAGCCAAGTCAGAGCT
GAATCGATTGCAGCAGGAAGAAACCCAGCTAGAGCAGAGCATTCAGGCCGGCCGAGTCCAGCTGGAGACCATCATCAAGT
CCCTGAAGTCAACTCAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGAGGCCCAC
AGGAGCCTGGAGCAGTGTGACCAGGTGCTGGACGGAGCCCACGCCACTAGCCTGACTGACCTGTCTGACCTGAGCGAGGG
CGTCTCCCTGGCAGAGAGGGGCGGTTTTGGAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACA
CGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGGAGCTGACCCCTTCAAA
GGTGACCCGTTCCAGAATGACCCCTTTGCAGAACAGCAGACAGCTTCAACAGATCCATTTGGAGGGGACCCTTTCAAAGA
AAGTGACCCATTCCGCGGCTCTGCCACTGAGGACTTCTTCAAGAAACAGACAAAGAATGACCCATTTACCTCAGACCCAT
TCACAAAAAACCCTTCCTTACCTTCAAAGCTCGACCCCTTTGAATCCAGTGATCCCTTTTCATCCTCCAGTGTCTCCTCA
AAAGGATCAGATCCCTTTGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTTCTGAGGGCTTTGCCGACTTCAG
CCAGATGTCCAAGCCCCCACCTTCTGGCCCTTTCACCTCCTCCTTGGGAGGGGCAGGATTCTCAGATGACCCCTTTAAAA
GTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCCGCTCCTCCACGGCCTAAACCGCCCAGCGGTAAAAGTACACCT
GTAAGCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCTGATCCATTCCAGCCACTTGGGGCTGACAGCGGCGACCCGTT
CCAAAGTAAAAAGGGGTTTGGGGACCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGG
CCTCTGCCTCGGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAG
AAGGCGGAACAGGAGAGGCTGGCTCGGCTGCGGCGGCAGGAGCAGGAGGACCTGGAACTGGCCATCGCGCTTAGCAAGGC
TGACATGCCCGCTGCCTAG
ATGGCGGCGCCGCTTATCCCCCTCTCCCAGCAGATTCCCACTGGAAATTCCTTGTATGAATCTTATTACAAGCAGGTTGA
TCCGGCATACACAGGGAGGGTGGGGGCGAGTGAAGCTGCGCTTTTTCTAAAGAAGTCTGGCCTCTCGGACATTACCCTTG
GGAAGATATGGGACTTGGCCGACCCAGAAGGTAAAGGGTTCTTGGACAAACAGGGTTTCTATGTTGCACTGAGACTGGTG
GCCTGTGCACAGAGTGGCCATGAGGTGACCTTGAGCAATCTGAATTTGAATATGCCGCCGCCTAAATTTCACGACACCAG
CAGCCCTCTGATGGTCACGCCGCCCTCTGCAGAGGCCCACTGGGCTGTGAGGGTGGAGGAAAAGGCCAAATTTGATGGAA
TTTTTGAAAGCCTCTTACCCATCAATGGTTTGCTCTCCGGAGACAAGGTCAAGCCGGTCCTCATGAACTCAAAACTGCCT
CTTGATGTCCTGGGCCGGGTCTGGGACCTCAGTGACATCGACAAGGATGGGCACTTGGACCGAGATGAGTTCGCTGTGGC
CATGCACTTGGTGTACCGAGCCCTCGAGAAGGAGCCCGTGCCCTCCGCCCTGCCTCCGTCCCTCATCCCACCCTCCAAGA
GAAAGAAGACTGTGTTCCCTGGCGCCGTCCCTGTCCTGCCCGCCAGCCCCCCTCCAAAAGACAGCCTCCGCTCCACGCCA
TCCCATGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAACAGGTATGGAGCC
CTCAGNNNNCTGGGTGGTGCCCGTGGCTGACAAGATGCGATTTGATGAGATATTCCTGAAGACCGACTTGGACCTGGACG
GCTATGTGAGTGGCCAGGAGGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCAGAACCTTCTAGCACACATATGGGCC
CTGGCCGATACGAGGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTATGTATTTCATTCAGCAGAAGGTCAG
TAAAGGCATCGACCCCCCTCAAGTCCTCTCGCCGGACATGGTCCCGCCCTCGGAGAGAGGCACACCCGGCCCGGACAGTT
CGGGCTCTCTCGGCTCCGGGGAGTTTACTGGCGTGAAGGAGCTCGATGACATCAGTCAAGAGATCGCCCAGTTACAAAGG
GAGAAATATTCACTGGAACAAGACATTAGAGAAAAGGAAGAGGCAATAAGACAGAAGACCAGCGAGGTACAGGAATTACA
AAATGACCTGGACCGGGAAACAAGCAGTTTGCAGGAGCTTGAGGCTCAGAAACAAGATGCTCAAGACCGCCTGGACGAGA
TGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTGCGGCAGAAGTGCCAGGACGAGACGCAGATGATTTCA
TCACTGAAAACGCAAATCCAGTCTCAGGAATCTGACTTAAAGTCCCAGGAAGATGATCTGAACCGAGCCAAGTCAGAGCT
GAATCGATTGCAGCAGGAAGAAACCCAGCTAGAGCAGAGCATTCAGGCCGGCCGAGTCCAGCTGGAGACCATCATCAAGT
CCCTGAAGTCAACTCAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGAGGCCCAC
AGGAGCCTGGAGCAGTGTGACCAGGTGCTGGACGGAGCCCACGCCACTAGCCTGACTGACCTGTCTGACCTGAGCGAGGG
CGTCTCCCTGGCAGAGAGGGGCGGTTTTGGAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACA
CGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGGAGCTGACCCCTTCAAA
GGTGACCCGTTCCAGAATGACCCCTTTGCAGAACAGCAGACAGCTTCAACAGATCCATTTGGAGGGGACCCTTTCAAAGA
AAGTGACCCATTCCGCGGCTCTGCCACTGAGGACTTCTTCAAGAAACAGACAAAGAATGACCCATTTACCTCAGACCCAT
TCACAAAAAACCCTTCCTTACCTTCAAAGCTCGACCCCTTTGAATCCAGTGATCCCTTTTCATCCTCCAGTGTCTCCTCA
AAAGGATCAGATCCCTTTGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTTCTGAGGGCTTTGCCGACTTCAG
CCAGATGTCCAAGCCCCCACCTTCTGGCCCTTTCACCTCCTCCTTGGGAGGGGCAGGATTCTCAGATGACCCCTTTAAAA
GTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCCGCTCCTCCACGGCCTAAACCGCCCAGCGGTAAAAGTACACCT
GTAAGCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCTGATCCATTCCAGCCACTTGGGGCTGACAGCGGCGACCCGTT
CCAAAGTAAAAAGGGGTTTGGGGACCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGG
CCTCTGCCTCGGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAG
AAGGCGGAACAGGAGAGGCTGGCTCGGCTGCGGCGGCAGGAGCAGGAGGACCTGGAACTGGCCATCGCGCTTAGCAAGGC
TGACATGCCCGCTGCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .40 RPM |
| SRP051959_skeletal_muscle | 9 .30 RPM |
| SRP051959_lymph_node | 13 .81 RPM |
| SRP051959_lung | 12 .59 RPM |
| SRP051959_liver | 4 .48 RPM |
| SRP051959_kidney | 18 .66 RPM |
| SRP051959_heart | 13 .14 RPM |
| SRP051959_colon | 12 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002660 | other_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007772 | other_paralog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000020658 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1122 | 81.20 | 74.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013985 retrocopies