Parental gene: | NDEL1, ENSCJAG00000014341 |
| Aliases: | None |
| Description: | nudE nuclear distribution E homolog (A. nidulans)-like 1 [Source:HGNC Symbol;Acc:17620] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:73385094..73416458(-) |
>ENSCJAG00000014341
ATGGATGGTGAAGATATACCAGATTTTTCAAGTTTAAAGGAGGAAACTGCCTATTGGAAGGAACTTTCCTTGAAGTATAA
GCAAAGCTTCCAGGAAGCTCGGGATGAGCTAGTTGAATTCCAGGAAGGAAGCAGAGAATTAGAAGCAGAGTTGGAGGCAC
AATTAGTACAGGCTGAACAAAGAAATAGAGACTTGCAGGCTGATAACCAAAGACTGAAATATGAAGTGGAGGCATTAAAG
GAGAAGCTAGAGCATCAGTATGCACAGAGCTACAAGCAGGTCTCAGTGTTAGAAGACGATTTAAGTCAGACTCGAGCCAT
TAAGGAGCAATTGCATAAGTATGTGAGAGAGCTGGAGCAGGCCAATGACGACCTGGAGCGAGCCAAAAGGGCAACAATAG
TTTCACTGGAAGACTTTGAACAGAGGCTAAATCAGGCCATTGAACGAAATGCGTTTTTAGAAAGTGAACTTGATGAAAAG
GAATCTTTGTTGGTCTCTGTACAGAGGTTAAAGGATGAAGCAAGAGATTTAAGGCAAGAACTAGCAGTTCGAGAAAGACA
GCAGGAAGTAACTAGAAAGTCGGCTCCTAGCTCTCCAACTCTAGACTGTGAAAAGATGGACTCTGCTGTCCAAGCGTCAC
TCTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCCTTCACCGAAAGCTATACCAAATGGTTTTGGT
ACCAGTCCACTAACTCCTTCTGCTAGGATATCAGCACTGAACATTGTGGGGGATCTCTTACGCAAAGTGGGGGCTTTAGA
ATCCAAATTAGCAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCACGAAAATCCTATATTTCAGGGAATGTTAACTGTG
GGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGAACAGGGCATACATCATTCTTCGACAAAGGGGCAGTAAATGGCTTT
GACCCAGCTCCTCCTCCTGGTCTGGGCTCCTCCCGTCCCTCGTCAGCACCGGGTATGCTGCCTCTCAGTGTGTGA
ATGGATGGTGAAGATATACCAGATTTTTCAAGTTTAAAGGAGGAAACTGCCTATTGGAAGGAACTTTCCTTGAAGTATAA
GCAAAGCTTCCAGGAAGCTCGGGATGAGCTAGTTGAATTCCAGGAAGGAAGCAGAGAATTAGAAGCAGAGTTGGAGGCAC
AATTAGTACAGGCTGAACAAAGAAATAGAGACTTGCAGGCTGATAACCAAAGACTGAAATATGAAGTGGAGGCATTAAAG
GAGAAGCTAGAGCATCAGTATGCACAGAGCTACAAGCAGGTCTCAGTGTTAGAAGACGATTTAAGTCAGACTCGAGCCAT
TAAGGAGCAATTGCATAAGTATGTGAGAGAGCTGGAGCAGGCCAATGACGACCTGGAGCGAGCCAAAAGGGCAACAATAG
TTTCACTGGAAGACTTTGAACAGAGGCTAAATCAGGCCATTGAACGAAATGCGTTTTTAGAAAGTGAACTTGATGAAAAG
GAATCTTTGTTGGTCTCTGTACAGAGGTTAAAGGATGAAGCAAGAGATTTAAGGCAAGAACTAGCAGTTCGAGAAAGACA
GCAGGAAGTAACTAGAAAGTCGGCTCCTAGCTCTCCAACTCTAGACTGTGAAAAGATGGACTCTGCTGTCCAAGCGTCAC
TCTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCCTTCACCGAAAGCTATACCAAATGGTTTTGGT
ACCAGTCCACTAACTCCTTCTGCTAGGATATCAGCACTGAACATTGTGGGGGATCTCTTACGCAAAGTGGGGGCTTTAGA
ATCCAAATTAGCAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCACGAAAATCCTATATTTCAGGGAATGTTAACTGTG
GGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGAACAGGGCATACATCATTCTTCGACAAAGGGGCAGTAAATGGCTTT
GACCCAGCTCCTCCTCCTGGTCTGGGCTCCTCCCGTCCCTCGTCAGCACCGGGTATGCTGCCTCTCAGTGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 23 .93 RPM |
| SRP051959_skeletal_muscle | 25 .42 RPM |
| SRP051959_lymph_node | 23 .29 RPM |
| SRP051959_lung | 39 .79 RPM |
| SRP051959_liver | 20 .79 RPM |
| SRP051959_kidney | 28 .84 RPM |
| SRP051959_heart | 25 .31 RPM |
| SRP051959_colon | 26 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000012878 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008744 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027930 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006517 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4072 | 73.94 | 51.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000014341 retrocopies