Parental gene:

NDEL1, ENSCJAG00000014341

Aliases:None
Description:nudE nuclear distribution E homolog (A. nidulans)-like 1 [Source:HGNC Symbol;Acc:17620]
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:73385094..73416458(-)


>ENSCJAG00000014341
ATGGATGGTGAAGATATACCAGATTTTTCAAGTTTAAAGGAGGAAACTGCCTATTGGAAGGAACTTTCCTTGAAGTATAA
GCAAAGCTTCCAGGAAGCTCGGGATGAGCTAGTTGAATTCCAGGAAGGAAGCAGAGAATTAGAAGCAGAGTTGGAGGCAC
AATTAGTACAGGCTGAACAAAGAAATAGAGACTTGCAGGCTGATAACCAAAGACTGAAATATGAAGTGGAGGCATTAAAG
GAGAAGCTAGAGCATCAGTATGCACAGAGCTACAAGCAGGTCTCAGTGTTAGAAGACGATTTAAGTCAGACTCGAGCCAT
TAAGGAGCAATTGCATAAGTATGTGAGAGAGCTGGAGCAGGCCAATGACGACCTGGAGCGAGCCAAAAGGGCAACAATAG
TTTCACTGGAAGACTTTGAACAGAGGCTAAATCAGGCCATTGAACGAAATGCGTTTTTAGAAAGTGAACTTGATGAAAAG
GAATCTTTGTTGGTCTCTGTACAGAGGTTAAAGGATGAAGCAAGAGATTTAAGGCAAGAACTAGCAGTTCGAGAAAGACA
GCAGGAAGTAACTAGAAAGTCGGCTCCTAGCTCTCCAACTCTAGACTGTGAAAAGATGGACTCTGCTGTCCAAGCGTCAC
TCTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCCTTCACCGAAAGCTATACCAAATGGTTTTGGT
ACCAGTCCACTAACTCCTTCTGCTAGGATATCAGCACTGAACATTGTGGGGGATCTCTTACGCAAAGTGGGGGCTTTAGA
ATCCAAATTAGCAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCACGAAAATCCTATATTTCAGGGAATGTTAACTGTG
GGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGAACAGGGCATACATCATTCTTCGACAAAGGGGCAGTAAATGGCTTT
GACCCAGCTCCTCCTCCTGGTCTGGGCTCCTCCCGTCCCTCGTCAGCACCGGGTATGCTGCCTCTCAGTGTGTGA

Library Parental gene expression (RPM)
SRP051959_colon 26 .34 RPM
SRP051959_heart 25 .31 RPM
SRP051959_kidney 28 .84 RPM
SRP051959_liver 20 .79 RPM
SRP051959_lung 39 .79 RPM
SRP051959_lymph_node 23 .29 RPM
SRP051959_skeletal_muscle 25 .42 RPM
SRP051959_spleen 23 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012878 ortholog_one2one 1 retrogene
retro_cpor_626,
Pan troglodytes ENSPTRG00000008744 ortholog_one2one 1 retrogene
retro_ptro_2000,
Ictidomys tridecemlineatus ENSSTOG00000027930 ortholog_one2one 1 retrogene
retro_itri_620,
Tursiops truncatus ENSTTRG00000006517 ortholog_one2one 1 retrogene
retro_ttru_1239,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4072 73.94 51.89
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Download FASTA sequences of all ENSCJAG00000014341 retrocopies