Parental gene: | NDEL1, ENSPTRG00000008744 |
| Aliases: | None |
| Description: | NudE nuclear distribution gene E homolog-like 1 [Source:UniProtKB/TrEMBL;Acc:K7CHH7] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:47652298..47686732(-) |
>ENSPTRG00000008744
ATGGCCTCGGACACCCAGGCAGTCCCTGACGTGTCGGGGAGGAGCCGGGCGCGGAGGTACGCGGAGTGGAGCTCNGGGCT
GCCTAGTGGCCGGGCCGGCGCTTTCTTGATCATGGATGGTGAAGATATACCAGATTTTTCAAGTTTAAAGGAGGAAACTG
CTTATTGGAAGGAACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGAGCTAGTTGAATTCCAGGAAGGA
AGCAGAGAATTAGAAGCAGAGTTGGAGGCACAATTAGTACAGGCTGAACAAAGAAATAGAGACTTGCAGGCTGATAACCA
AAGACTGAAATATGAAGTGGAGGCATTAAAGGAGAAGCTAGAGCATCAATATGCACAGAGCTATAAGCAGGTCTCAGTGT
TAGAAGATGATTTAAGTCAGACTCGGGCCATTAAGGAGCAGTTGCATAAGTATGTGAGAGAGCTGGAGCAGGCCAACGAC
GACCTGGAGCGAGCCAAAAGGGCAACAATAGTTTCACTGGAAGACTTTGAACAAAGGCTAAATCAGGCCATTGAACGAAA
TGCATTTTTAGAAAGTGAACTTGATGAAAAGGAATCTTTGTTGGTCTCTGTACAGAGGTTAAAGGATGAAGCAAGAGATT
TAAGGCAAGAACTAGCAGTTCGGGAAAGACAACAGGAAGTAACTAGAAAGTCGGCTCCTAGCTCTCCAACTCTAGACTGT
GAAAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCC
TTCACCGAAAGCTATACCAAATGGTTTTGGTACCAGTCCACTAACTCCCTCTGCTAGGATATCAGCACTAAACATCGTGG
GGGATCTCTTACGGAAAGTAGGGGCTTTAGAATCCAAATTAGCAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCACGA
AAATCCTATATTTCAGGGAATGTTAACTGTGGGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATC
TTTCTTCGACAAAGGGGCAGTAAACGGCTTTGACCCCGCTCCTCCTCCTCCTGGTCTGGGCTCCTCGCGTCCATCGTCAG
CGCCGGGTATGCTGCCTCTCAGTGTGTGA
ATGGCCTCGGACACCCAGGCAGTCCCTGACGTGTCGGGGAGGAGCCGGGCGCGGAGGTACGCGGAGTGGAGCTCNGGGCT
GCCTAGTGGCCGGGCCGGCGCTTTCTTGATCATGGATGGTGAAGATATACCAGATTTTTCAAGTTTAAAGGAGGAAACTG
CTTATTGGAAGGAACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGAGCTAGTTGAATTCCAGGAAGGA
AGCAGAGAATTAGAAGCAGAGTTGGAGGCACAATTAGTACAGGCTGAACAAAGAAATAGAGACTTGCAGGCTGATAACCA
AAGACTGAAATATGAAGTGGAGGCATTAAAGGAGAAGCTAGAGCATCAATATGCACAGAGCTATAAGCAGGTCTCAGTGT
TAGAAGATGATTTAAGTCAGACTCGGGCCATTAAGGAGCAGTTGCATAAGTATGTGAGAGAGCTGGAGCAGGCCAACGAC
GACCTGGAGCGAGCCAAAAGGGCAACAATAGTTTCACTGGAAGACTTTGAACAAAGGCTAAATCAGGCCATTGAACGAAA
TGCATTTTTAGAAAGTGAACTTGATGAAAAGGAATCTTTGTTGGTCTCTGTACAGAGGTTAAAGGATGAAGCAAGAGATT
TAAGGCAAGAACTAGCAGTTCGGGAAAGACAACAGGAAGTAACTAGAAAGTCGGCTCCTAGCTCTCCAACTCTAGACTGT
GAAAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCC
TTCACCGAAAGCTATACCAAATGGTTTTGGTACCAGTCCACTAACTCCCTCTGCTAGGATATCAGCACTAAACATCGTGG
GGGATCTCTTACGGAAAGTAGGGGCTTTAGAATCCAAATTAGCAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCACGA
AAATCCTATATTTCAGGGAATGTTAACTGTGGGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATC
TTTCTTCGACAAAGGGGCAGTAAACGGCTTTGACCCCGCTCCTCCTCCTCCTGGTCTGGGCTCCTCGCGTCCATCGTCAG
CGCCGGGTATGCTGCCTCTCAGTGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 32 .67 RPM |
| SRP007412_cerebellum | 12 .62 RPM |
| SRP007412_heart | 3 .35 RPM |
| SRP007412_kidney | 4 .55 RPM |
| SRP007412_liver | 7 .79 RPM |
| SRP007412_testis | 6 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014341 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012878 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027930 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006517 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2000 | 98.85 | 91.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008744 retrocopies