Parental gene:

CCNI, ENSCJAG00000014768

Aliases:CCNI, cyclin-I
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:3:117525855..117551604(+)


>ENSCJAG00000014768
CAGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGCCTTTGGAAAACCAGAGATTGTCTTTCCTGTTGGAAAAGGCAAT
CTCTAGGGAAGCACAGATGTGGAAGGTGAATGTGCGGAAAATACCTTCAAATCAGAATGTTTCTCCAGCCCAGAGAGATG
AAGTAATTCAATGGCTAGCCAAACTCAAGTACCAATTCAACCTTTACCCAGAAACATTTGCTCTGGCTAGCAGTCTTTTG
GACAGGTTTTTAGCTACTGTAAAGGCTCATCCAAAATACTTGAGTTGTATTGCCATCAGCTGTTTTTTCCTAGCTGCCAA
GACTGTTGAGGAAGATGAGAGAATTCCAGTACTGAAAGTATTGGCAAGAGACAGTTTCTGTGGATGTTCCTCATCTGAAA
TTTTGAGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTCATATT
TTCCATGCCATTGCAGTGTCAACTAGGCCTCAGTTACTTTTCAGTTTGCCCAAATTGAGCCCATCTCAACATTTGGCAGT
CCTTACCAAGCAACTACTTCACTGTATGGCCTGCAACCAACTTCTGCAATTCAGAGGATCCATGCTTGCTCTGGCCATGG
TTAGCCTGGAAATGGAGAAACTCATTCCTGATTGGCTTTCTCTTACAATTGAACTACTTCAGAAAGCACAGATGGATAGC
TCCCAGTTGATCCATTGTCGGGAGCTTGTGGCACATCACCTTTCTACTCTGCAGTCTTCCCTGCCTCTAAATTCCGTTTA
TGTCTACCGTCCCCTCAAGCACACCCTGGTAACCTGTGACAAAGGAGTGTTCAGATTACATCCCTCCTCTGTCTCAGGCC
CAGACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCTTTTACCATCATCTCCCAGCTGCC
AATGGGTGCAAGCAGATCTCTGCTAAACGCAAAGTAGAGGAAATGGAAGTGGATGACTTCTATGATGGAATCAAACGGCT
CTATAATGAAGATAATGTTTCAGAAAATGTGGGTTGTGTGTGTGGCACTGATATATCAAGACAGGAGGGACATGCTTCTC
CTTGTCCACCTTTGCAGCCTGTTTCTGTCATGTAG

Library Parental gene expression (RPM)
SRP051959_colon 22 .30 RPM
SRP051959_heart 42 .36 RPM
SRP051959_kidney 29 .71 RPM
SRP051959_liver 4 .94 RPM
SRP051959_lung 30 .79 RPM
SRP051959_lymph_node 26 .32 RPM
SRP051959_skeletal_muscle 34 .79 RPM
SRP051959_spleen 32 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013222 within_species_paralog 1 retrogene
retro_cjac_3834,
Callithrix jacchus ENSCJAG00000015341 within_species_paralog 1 retrogene
retro_cjac_2319,
Echinops telfairi ENSETEG00000000952 ortholog_one2one 1 retrogene
retro_etel_1137,
Loxodonta africana ENSLAFG00000029218 ortholog_one2one 1 retrogene
retro_lafr_295,
Macaca mulatta ENSMMUG00000019904 ortholog_one2one 1 retrogene
retro_mmul_2529,
Mus musculus ENSMUSG00000063015 ortholog_one2one 2 retrogenes
retro_mmus_1211, retro_mmus_2730,
Tarsius syrichta ENSTSYG00000009907 ortholog_one2one 1 retrogene
retro_tsyr_834,
Vicugna pacos ENSVPAG00000011865 ortholog_one2one 1 retrogene
retro_vpac_197,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1311 95.60 100.00
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Download FASTA sequences of all ENSCJAG00000014768 retrocopies