Parental gene:

ENSCJAG00000015341

Aliases:CCNG1, cyclin-G1
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:2:24592986..24600148(+)


>ENSCJAG00000015341
ATGATTGAGGTACTCACAACAACTGACTCTCAGAAACTGCTACAGCAGCTGAATGCCCTTTTGGAACAGGAGTCTAGATG
TCAGCCAAAGGTCTGTGGCTTGAGACTAATTGAGTCTGCACACGATAATGGCCTCAGAATGACTGCAAGACTAAGGGACT
TTGAAGTAAAAGATCTTCTTAGTCTAACTCAGTTCTTTGGCTTCGACACAGAGACATTTTCTCTAGCTGTGAATTTACTG
GACAGATTCCTGTCTAAAATGAAGGTACAGCCCAAACACCTTGGATGTGTTGGACTGAGCTGCTTCTATTTGGCTGTAAA
ATCAATAGAAGAGGAAAGGAATGTCCCATTGGCAACTGACTTAATCCGAATAAGTCAATACAGGTTTACGGTTTCAGACT
TGATGCGAATGGAAAAGATTGTATTGGAGAAGGTGTGCTGGAAAGTCAAAGCTACTACTGCCTTTCAATTTCTGCAACTG
TATTATTCACTCCTTCAAGAGAACTTGCCATTTGAGAGGAGAAATAGCATTAATTTTGAAAGATTAGAAGCTCAACTTAA
GGCATGTCATTGCAGGATCATTTTTTCTAAAGCAAAGCCTTCTGTGTTGGCATTGTCTATCATTGCATTAGAGATCCAAG
CACAGAAGTGTGTAGAGTTAACAGAAGGAGTAGAATGTCTTCAGAAACATTCCAAGATAAATGGCAGAGATTTGACCTTC
TGGCAAGAGCTTGTATCCAAGTGTTTAACTGAATATTCATCAAACAAGTGTTCCAAACCAAATGTTCAGAAGTTGAAATG
GATTGTTTCTGGGCGTACTGCACGGCAATTGAAGCATAGTTACTACAGAATAACTCACCTTCCAACAATTCCTGAAATGG
TTCCTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 191 .62 RPM
SRP051959_skeletal_muscle 304 .79 RPM
SRP051959_lymph_node 141 .25 RPM
SRP051959_lung 74 .55 RPM
SRP051959_liver 174 .43 RPM
SRP051959_kidney 91 .92 RPM
SRP051959_heart 53 .57 RPM
SRP051959_colon 69 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006607 possible_ortholog 2 retrogenes
retro_btau_1064, retro_btau_763,
Canis familiaris ENSCAFG00000017207 possible_ortholog 1 retrogene
retro_cfam_1657,
Callithrix jacchus ENSCJAG00000013222 within_species_paralog 1 retrogene
retro_cjac_3834,
Callithrix jacchus ENSCJAG00000014768 within_species_paralog 1 retrogene
retro_cjac_1311,
Cavia porcellus ENSCPOG00000000880 ortholog_one2many 1 retrogene
retro_cpor_771,
Dasypus novemcinctus ENSDNOG00000015166 ortholog_one2many 1 retrogene
retro_dnov_1275,
Dipodomys ordii ENSDORG00000014293 possible_ortholog 1 retrogene
retro_dord_486,
Equus caballus ENSECAG00000018880 possible_ortholog 1 retrogene
retro_ecab_152,
Felis catus ENSFCAG00000027366 possible_ortholog 1 retrogene
retro_fcat_763,
Myotis lucifugus ENSMLUG00000001667 possible_ortholog 1 retrogene
retro_mluc_1341,
Monodelphis domestica ENSMODG00000007651 ortholog_one2many 1 retrogene
retro_mdom_1018,
Mus musculus ENSMUSG00000020326 ortholog_one2many 1 retrogene
retro_mmus_1534,
Oryctolagus cuniculus ENSOCUG00000002129 ortholog_many2many 3 retrogenes
retro_ocun_1287, retro_ocun_512, retro_ocun_615,
Otolemur garnettii ENSOGAG00000007639 possible_ortholog 1 retrogene
retro_ogar_2452,
Pongo abelii ENSPPYG00000016016 ortholog_one2many 1 retrogene
retro_pabe_3373,
Pteropus vampyrus ENSPVAG00000017902 possible_ortholog 1 retrogene
retro_pvam_1027,
Sarcophilus harrisii ENSSHAG00000007465 ortholog_one2many 2 retrogenes
retro_shar_328, retro_shar_490,
Vicugna pacos ENSVPAG00000008340 possible_ortholog 1 retrogene
retro_vpac_351,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2319 86.28 76.61
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Download FASTA sequences of all ENSCJAG00000015341 retrocopies