Parental gene:

ENOPH1, ENSCJAG00000015251

Aliases:None
Description:enolase-phosphatase 1 [Source:HGNC Symbol;Acc:24599]
Organism:Marmoset (Callithrix jacchus)
Coordinates:3:111777007..111824136(-)


>ENSCJAG00000015251
ATGGTCGTGCTTTCGGTGCCCGCTGAAGTCACCGTGATTCTGTTAGATATCGAAGGTACCACAACCCCGATTGCTTTCGT
GAAGGACATTTTATTTCCTTACATCGAAAAAAATGTTAAAGAGTATCTGCAGACACATTGGGAAGAAGAGGAGTGCCAGC
AGGATGTCAGTCTTTTGAGGAAACAGGCTGAAGAGGACGCCCACCTGGATGGGGCCGTTCCTATCCCTGCAGCATCTGGG
AGTGGAATGGATGATCTGCAACAGATGATCCAGGCCGTGGTAGATAATGTGTGCTGGCAGATGTCCCTGGATCGAAAGAC
CACTGCACTCAAACAGCTGCAGGGCCACATGTGGAGGACGGCATTCACAGCTGGGCTCATGAAAGCAGAGTTCTTTGCAG
ATGTAGTTCCAGCAGTCAGGAAATGGAGAGAGGCTGGAATGAAGGTGTACGTCTATTCTTCAGGGAGTGTGGAGGCACAG
AAACTATTGTTTGGGCATTCTACAGAGGGGGATATTCTTGAGCTTGTCGATGGTCACTTTGATACCAAGATTGGACGCAA
AGTGGAGAGTGAAAGTTATAGAAAGATTGCAGACAGCATTGGGTGCTCAACCAACAACATTTTGTTTCTGACAGATGTTA
CTCGAGAGGCCAGTGCTGCCGAGGAAGCGGATGTGCACGTAGCTGTGGTGGTGAGACCGGGCAACGCAGGACTGACAGAT
GATGAGAAGACTTACTACAGCCTCATCACATCCTTCAGCGAACTATACCTGCCTTCCTCAACCTAG

Library Parental gene expression (RPM)
SRP051959_spleen 17 .67 RPM
SRP051959_skeletal_muscle 7 .25 RPM
SRP051959_lymph_node 16 .05 RPM
SRP051959_lung 14 .38 RPM
SRP051959_liver 9 .86 RPM
SRP051959_kidney 20 .17 RPM
SRP051959_heart 13 .23 RPM
SRP051959_colon 10 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005140 ortholog_one2one 2 retrogenes
retro_amel_1186, retro_amel_930,
Choloepus hoffmanni ENSCHOG00000003283 ortholog_one2one 4 retrogenes
retro_chof_2150, retro_chof_470, retro_chof_486, retro_chof_596,
Equus caballus ENSECAG00000019612 ortholog_one2one 1 retrogene
retro_ecab_164,
Erinaceus europaeus ENSEEUG00000004274 ortholog_one2many 1 retrogene
retro_eeur_563,
Homo sapiens ENSG00000145293 ortholog_one2one 1 retrogene
retro_hsap_2900,
Gorilla gorilla ENSGGOG00000003719 ortholog_one2one 1 retrogene
retro_ggor_2010,
Loxodonta africana ENSLAFG00000008619 ortholog_one2one 1 retrogene
retro_lafr_1158,
Macropus eugenii ENSMEUG00000011458 ortholog_one2one 1 retrogene
retro_meug_1125,
Myotis lucifugus ENSMLUG00000014460 ortholog_one2one 1 retrogene
retro_mluc_2504,
Otolemur garnettii ENSOGAG00000002502 ortholog_one2one 1 retrogene
retro_ogar_1549,
Pongo abelii ENSPPYG00000014887 ortholog_one2one 1 retrogene
retro_pabe_2399,
Pan troglodytes ENSPTRG00000016218 ortholog_one2one 1 retrogene
retro_ptro_1960,
Tursiops truncatus ENSTTRG00000001800 ortholog_one2one 1 retrogene
retro_ttru_1231,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1376 73.51 69.73
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2. retro_cjac_2375 77.82 100.00
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Download FASTA sequences of all ENSCJAG00000015251 retrocopies