Parental gene: | VAMP7, ENSCJAG00000016289 |
| Aliases: | None |
| Description: | vesicle-associated membrane protein 7 [Source:HGNC Symbol;Acc:11486] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | Y:2745955..2806225(+) |
>ENSCJAG00000016289
ATGGCCATTCTTTTTGCTGTTGTGGCCAGGGGGACCACTATCCTTGCCAAACATGCTTGGTGTGGAGGAAACTTCCTGGA
GGTGACAGAGCAGATTCTGGCTAAGATACCTTCTGAAAATAACAAACTAACATACTCACATGGCAATTATTTGTTTCATT
ACATCTGCCAAGACAGGATTGTATATCTTTGTATCACTGATGATGATTTTGAACGTTCCCGAGCCTTTAATTTTTTAGAC
TATATATTTAAGGTTTATATGGAAGCAGTTTTTATGCTGCCCATATTTTTTCTAGCATTCCATGGTGTAAATTGTCATTC
CTCTTATTTTTGTTTTCCTATTAAGCATCACTCCGAGAATAAGGGCCTAGACAAAGTGATGGAGACTCAAGCCCAAGTGG
ATGAACTAAAAGGAATTATGGTCAGAAACATAGATCTGGTAGCTCAGCGAGGAGAAAGATTGGAACTATTGATTGACAAA
ACAGAAAATCTCGTGGATTCTTCTGTCACCTTCAAAACGACTAGCAGAAATCTTGCCCGAGCCATGTGTATGAAGAACCT
CAAGCTCACTATCATCATTATCGTCATATCAATTGTGTTCATCTATATCATTGTCTCACCTCTCTGTGGTGGATTTACAT
GGCCAAGCTGTGTGAAGAAATAA
ATGGCCATTCTTTTTGCTGTTGTGGCCAGGGGGACCACTATCCTTGCCAAACATGCTTGGTGTGGAGGAAACTTCCTGGA
GGTGACAGAGCAGATTCTGGCTAAGATACCTTCTGAAAATAACAAACTAACATACTCACATGGCAATTATTTGTTTCATT
ACATCTGCCAAGACAGGATTGTATATCTTTGTATCACTGATGATGATTTTGAACGTTCCCGAGCCTTTAATTTTTTAGAC
TATATATTTAAGGTTTATATGGAAGCAGTTTTTATGCTGCCCATATTTTTTCTAGCATTCCATGGTGTAAATTGTCATTC
CTCTTATTTTTGTTTTCCTATTAAGCATCACTCCGAGAATAAGGGCCTAGACAAAGTGATGGAGACTCAAGCCCAAGTGG
ATGAACTAAAAGGAATTATGGTCAGAAACATAGATCTGGTAGCTCAGCGAGGAGAAAGATTGGAACTATTGATTGACAAA
ACAGAAAATCTCGTGGATTCTTCTGTCACCTTCAAAACGACTAGCAGAAATCTTGCCCGAGCCATGTGTATGAAGAACCT
CAAGCTCACTATCATCATTATCGTCATATCAATTGTGTTCATCTATATCATTGTCTCACCTCTCTGTGGTGGATTTACAT
GGCCAAGCTGTGTGAAGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 26 .41 RPM |
| SRP051959_skeletal_muscle | 13 .87 RPM |
| SRP051959_lymph_node | 17 .67 RPM |
| SRP051959_lung | 23 .86 RPM |
| SRP051959_liver | 23 .87 RPM |
| SRP051959_kidney | 33 .10 RPM |
| SRP051959_heart | 18 .22 RPM |
| SRP051959_colon | 18 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000024405 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000051412 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001270 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000025036 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1958 | 91.89 | 77.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2410 | 89.17 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016289 retrocopies