Parental gene:

CNBP, ENSCJAG00000017430

Aliases:None
Description:CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164]
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:67804400..67819889(+)


>ENSCJAG00000017430
ATGAGCAGCAATGAATGCTTCAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATGCCCTACTGGTGGAGGCCGTGGTCG
TGGAATGAGAAGCCGTGGCAGAGGTGGTTTTACCTCGGATAGAGGTTTCCAGTTTGTTTCCTCGTCTCTTCCAGACATCT
GTTATCGCTGCGGTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTCAGGAGGATGAAGCCTGCTATAACTGCGGTAGA
GGTGGTCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAGTGCTGCTACAATTGTGGCAAACCAGGCCA
TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAAGTGCTATTCTTGTGGAGAATTTGGACACATTCAAAAAGACTGCA
CCAAAGTGAAGTGCTATAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAACTGTTAC
CGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATGCACAATTGAGGCTACAGCCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 81 .70 RPM
SRP051959_skeletal_muscle 206 .28 RPM
SRP051959_lymph_node 73 .88 RPM
SRP051959_lung 77 .24 RPM
SRP051959_liver 93 .66 RPM
SRP051959_kidney 94 .22 RPM
SRP051959_heart 120 .47 RPM
SRP051959_colon 44 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012159 ortholog_one2one 1 retrogene
retro_btau_19,
Equus caballus ENSECAG00000009512 ortholog_one2one 1 retrogene
retro_ecab_1072,
Echinops telfairi ENSETEG00000008408 ortholog_one2one 5 retrogenes
retro_etel_12, retro_etel_1791, retro_etel_2192, retro_etel_237, retro_etel_583,
Felis catus ENSFCAG00000028042 possible_ortholog 2 retrogenes
retro_fcat_1922, retro_fcat_2001,
Loxodonta africana ENSLAFG00000002502 ortholog_one2one 1 retrogene
retro_lafr_49,
Oryctolagus cuniculus ENSOCUG00000008696 ortholog_one2one 2 retrogenes
retro_ocun_1626, retro_ocun_208,
Otolemur garnettii ENSOGAG00000013898 possible_ortholog 1 retrogene
retro_ogar_144,
Pteropus vampyrus ENSPVAG00000015070 ortholog_one2one 1 retrogene
retro_pvam_908,
Sorex araneus ENSSARG00000011874 ortholog_one2one 1 retrogene
retro_sara_397,
Sarcophilus harrisii ENSSHAG00000017132 ortholog_one2one 1 retrogene
retro_shar_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4079 69.86 82.02
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Download FASTA sequences of all ENSCJAG00000017430 retrocopies