Parental gene:

ENSETEG00000008408

Aliases:None
Description:None
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_6669:1248..4134(-)


>ENSETEG00000008408
ATGAGCAGCAACGAATGCTTCAAGTGTGGGCGCTCTGGCCACTGGGCCCGGGAATGCCCTACTGGAGGCGGCCGCGGCCG
CGGAATGAGAAGCCGTGGCAGAGGTGGTTTTACCTCGGATAGAGGTTTCCAGTTTGTGTCCTCGTCTCTTCCAGACATCT
GTTACCGTTGTGGTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTCAGGAGGATGCCTGCTATAACTGCGGTAGAGGT
GGTCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGAGAGAGCAGTGCTGCTACAACTGTGGCAAACCAGGCCATCT
GGCTCGTGACTGTGACCACGCTGATGAGCAGAAGTGCTACTCTTGTGGAGAATTTGGACACATTCAAAAAGACTGCACCA
AAGTGAAGTGCTACAGGTGTGGTGAGACTGGTCATGTAGCCATCAACTGCAGCAAGACGAGCGAAGTCAACTGCTACCGC
TGTGGCGAATCAGGGCACCTTGCACGGGAATGCACAATTGAGGCTACAGCTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015334 possible_ortholog 2 retrogenes
retro_amel_1285, retro_amel_1773,
Bos taurus ENSBTAG00000012159 ortholog_one2one 1 retrogene
retro_btau_19,
Canis familiaris ENSCAFG00000004320 possible_ortholog 2 retrogenes
retro_cfam_1272, retro_cfam_23,
Callithrix jacchus ENSCJAG00000017430 ortholog_one2one 1 retrogene
retro_cjac_4079,
Cavia porcellus ENSCPOG00000012816 possible_ortholog 2 retrogenes
retro_cpor_424, retro_cpor_94,
Dipodomys ordii ENSDORG00000002919 possible_ortholog 1 retrogene
retro_dord_569,
Equus caballus ENSECAG00000009512 ortholog_one2one 1 retrogene
retro_ecab_1072,
Felis catus ENSFCAG00000028042 possible_ortholog 2 retrogenes
retro_fcat_1922, retro_fcat_2001,
Homo sapiens ENSG00000169714 possible_ortholog 1 retrogene
retro_hsap_50,
Gorilla gorilla ENSGGOG00000010085 possible_ortholog 1 retrogene
retro_ggor_2926,
Loxodonta africana ENSLAFG00000002502 ortholog_one2one 1 retrogene
retro_lafr_49,
Macropus eugenii ENSMEUG00000011699 possible_ortholog 1 retrogene
retro_meug_55,
Myotis lucifugus ENSMLUG00000012554 possible_ortholog 1 retrogene
retro_mluc_141,
Macaca mulatta ENSMMUG00000011585 possible_ortholog 1 retrogene
retro_mmul_2505,
Mustela putorius furo ENSMPUG00000017315 possible_ortholog 3 retrogenes
retro_mputfur_1465, retro_mputfur_1555, retro_mputfur_583,
Mus musculus ENSMUSG00000030057 possible_ortholog 1 retrogene
retro_mmus_230,
Nomascus leucogenys ENSNLEG00000014482 possible_ortholog 1 retrogene
retro_nleu_1986,
Oryctolagus cuniculus ENSOCUG00000008696 ortholog_one2one 2 retrogenes
retro_ocun_1626, retro_ocun_208,
Otolemur garnettii ENSOGAG00000013898 possible_ortholog 1 retrogene
retro_ogar_144,
Ochotona princeps ENSOPRG00000005487 possible_ortholog 5 retrogenes
retro_opri_139, retro_opri_49, retro_opri_496, retro_opri_566, retro_opri_965,
Pongo abelii ENSPPYG00000013423 possible_ortholog 1 retrogene
retro_pabe_3658,
Pan troglodytes ENSPTRG00000015369 possible_ortholog 1 retrogene
retro_ptro_3131,
Pteropus vampyrus ENSPVAG00000015070 ortholog_one2one 1 retrogene
retro_pvam_908,
Rattus norvegicus ENSRNOG00000010239 possible_ortholog 2 retrogenes
retro_rnor_207, retro_rnor_727,
Sorex araneus ENSSARG00000011874 ortholog_one2one 1 retrogene
retro_sara_397,
Sarcophilus harrisii ENSSHAG00000017132 ortholog_one2one 1 retrogene
retro_shar_666,
Ictidomys tridecemlineatus ENSSTOG00000000173 possible_ortholog 1 retrogene
retro_itri_113,
Tarsius syrichta ENSTSYG00000004344 possible_ortholog 1 retrogene
retro_tsyr_1889,
Vicugna pacos ENSVPAG00000007138 possible_ortholog 1 retrogene
retro_vpac_548,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_12 81.92 100.00
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2. retro_etel_237 78.00 82.49
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3. retro_etel_583 86.45 85.88
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4. retro_etel_1791 66.14 71.19
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5. retro_etel_2192 77.60 70.06
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Download FASTA sequences of all ENSETEG00000008408 retrocopies