Parental gene:

IMPDH1, ENSCJAG00000017770

Aliases:None
Description:Inosine-5'-monophosphate dehydrogenase A [Source:UniProtKB/TrEMBL;Acc:F7EBY6]
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:117669359..117690072(+)


>ENSCJAG00000017770
ATGGAGGGGCCGCTCATTCCGCTACCGCTGCAGGGAGGCGGAGCCGCTGCCGTTCCGGAGCCCGGAGCCCGGCAACACCC
GGGACACGAGACGGCGGCGCAGCGGTACAGCGCCCGACTGCTGCAGGCCGGCTACGAGCCCGAGAGCTGTTTCCTCCTAG
AAGTATCTTCAGTGGTCTTACTGGCAGGTGTAGGTGTCCAGATGGATCGCCTTCGCAGGGCTAGCATGGCGGACTACCTG
ATCAGCGGCGGCACCGGCTACGTGCCCGAGGACGGGCTCACCGCGCAGCAGCTCTTCGCCAGCGCCGACGGCCTCACCTA
CAACGACTTCCTGATCCTCCCAGGATTCATAGACTTCATTGCTGATGAGGTGGACCTGACCTCAGCCTTGACCCGGAAGA
TCACGCTGAAGACGCCGCTGATCTCCTCCCCCATGGACACTGTGACAGAGGCTGACATGGCCATTGCAATGGCTCTGATG
GGAGGTATTGGTTTCATTCACCACAACTGCACCCCAGAGTTCCAGGCCAACGAGGTGCGGAAGGTCAAGAAGTTTGAACA
GGGCTTCATCACGGACCCCGTGGTGCTGAGCCCCTCGCACACTGTGGGTGACGTGCTGGAGGCCAAGATGCGGCATGGCT
TCTCTGGCATCCCCATCACCGAGACGGGCACCATGGGCAGCAAGCTGGTAGGCATCGTCACCTCCCGAGACATCGACTTT
CTTGCTGAGAAGGACCACACCACCCTCCTCAGTGAGGTGATGACACCAAGGATCGAGCTGGTGGTGGCTCCAGCAGGCGT
GACATTGAAAGAGGCAAATGAGATCCTGCAGCGTAGCAAGAAAGGGAAGCTGCCTATTGTCAATGATCATGATGAACTGG
TGGCCATCATCGCCCGCACCGACCTGAAGAAGAACCGAGACTACCCTCTGGCCTCCAAGGATTCCCACAAGCAGCTGCTG
TGCGGGGCAGCTGTGGGCACCCGTGAGGATGACAAATACCGCCTGGACCTGCTCACCCAGGCAGGCGTCGATGTCATAGT
TTTGGACTCGTCCCAAGGGAACTCAGTGTATCAGATTGCCATGGTGCATTACATCAAGCAGAAGTACCCCCATCTCCAGG
TGATTGGGGGGAACGTGGTGACAGCAGCCCAGGCCAAGAACCTGATTGACGCTGGTGTGGACGGGCTGCGCGTGGGCATG
GGCTGCGGCTCCATCTGCATCACCCAGGAAGTGATGGCCTGCGGTCGGCCCCAGGGCACTGCTGTGTACAAGGTGGCCGA
GTATGCTCGGCGCTTTGGTGTGCCCATCATAGCTGATGGCGGCATCCAGACCGTGGGGCACGTGGTCAAGGCCCTGGCCC
TTGGAGCCTCCACAGTGATGATGGGCTCCCTGCTGGCCGCCACCACGGAGGCCCCCGGTGAGTACTTCTTCTCAGACGGA
GTGCGGCTCAAGAAATACCGGGGCATGGGCTCGCTGGATGCCATGGAGAAGAGCAGCAGCAGCCAGAAACGATACTTCAG
CGAGGGGGATAAGGTGAAGATTGCACAGGGTGTCTCAGGCTCCATCCAGGACAAAGGGTCTATTCAGAAGTTCGTGCCCT
ACCTCATAGCAGGCATCCAGCATGGCTGCCAGGATATTGGAGCCCGCAGCCTGTCTGTCCTTCGGTCCATGATGTACTCA
GGAGAGCTCAAGTTTGAGAAGCGGACCATGTCGGCCCAGATCGAGGGTGGCGTCCATGGCCTGCACTCTTACGAGAAGCG
GCTGTACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .01 RPM
SRP051959_skeletal_muscle 2 .07 RPM
SRP051959_lymph_node 4 .20 RPM
SRP051959_lung 4 .21 RPM
SRP051959_liver 3 .10 RPM
SRP051959_kidney 2 .73 RPM
SRP051959_heart 4 .51 RPM
SRP051959_colon 3 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000106348 ortholog_one2one 7 retrogenes
retro_hsap_2360, retro_hsap_2368, retro_hsap_2608, retro_hsap_3797, retro_hsap_4005, retro_hsap_4247, retro_hsap_4808,
Gorilla gorilla ENSGGOG00000003963 ortholog_one2many 6 retrogenes
retro_ggor_1790, retro_ggor_1798, retro_ggor_1827, retro_ggor_2551, retro_ggor_2688, retro_ggor_2993,
Macropus eugenii ENSMEUG00000016082 ortholog_one2one 2 retrogenes
retro_meug_2095, retro_meug_542,
Macaca mulatta ENSMMUG00000014509 ortholog_one2many 2 retrogenes
retro_mmul_1551, retro_mmul_317,
Nomascus leucogenys ENSNLEG00000012341 ortholog_one2one 1 retrogene
retro_nleu_2508,
Pongo abelii ENSPPYG00000017976 ortholog_one2one 7 retrogenes
retro_pabe_2133, retro_pabe_2138, retro_pabe_2346, retro_pabe_3102, retro_pabe_3292, retro_pabe_3392, retro_pabe_3736,
Pan troglodytes ENSPTRG00000019660 ortholog_one2one 7 retrogenes
retro_ptro_1087, retro_ptro_1724, retro_ptro_1758, retro_ptro_2575, retro_ptro_2719, retro_ptro_2886, retro_ptro_3198,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2045 76.32 53.99
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Download FASTA sequences of all ENSCJAG00000017770 retrocopies