Parental gene:

TMEM50A, ENSCJAG00000018575

Aliases:None
Description:transmembrane protein 50A [Source:HGNC Symbol;Acc:30590]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:59342081..59362989(+)


>ENSCJAG00000018575
ATGTCTGGATTTCTAGAGGGCTTGAGATGCTCAGAATGCATTGACTGGGGGGAAAAGCGCAATACTATTGCTTCCATTGC
TGCTGGTGTACTCTTTTTTACAGGCTGGTGGATTATCATAGATGCAGCTGTTATTTATTCCCCCATGGAAGATTTCAACC
ACTCATACCATGCCTGTGGTGTTATAGCAACCATAGCCTTCCTAATGATTAATGCAGTATCAAATGGACAAGTCCGAGGT
GATAGTTACAGTGAAGGTTGTCTGGGTCAAACAGGTGCTCGTATTTGGCTGTTCATTGGTTTCATGTTGGCCTTTGGCTC
TCTGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGCTAAAGAAAAAGTTGTAGTATACCCTGGAATTGCTGTAT
TTTTCCAGAATGCCTTCATCTTTTTTGGAGGACTGGTTTTTAAGTTTGGCCGCACTGAAGACTTATGGCAGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 21 .97 RPM
SRP051959_skeletal_muscle 8 .25 RPM
SRP051959_lymph_node 27 .88 RPM
SRP051959_lung 23 .08 RPM
SRP051959_liver 17 .33 RPM
SRP051959_kidney 28 .00 RPM
SRP051959_heart 16 .19 RPM
SRP051959_colon 16 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012615 ortholog_one2one 1 retrogene
retro_cpor_707,
Echinops telfairi ENSETEG00000007483 ortholog_one2one 1 retrogene
retro_etel_2061,
Macropus eugenii ENSMEUG00000002060 ortholog_one2one 1 retrogene
retro_meug_1270,
Macaca mulatta ENSMMUG00000032217 ortholog_one2one 1 retrogene
retro_mmul_1408,
Ochotona princeps ENSOPRG00000001182 ortholog_one2one 2 retrogenes
retro_opri_546, retro_opri_62,
Pongo abelii ENSPPYG00000001711 ortholog_one2one 1 retrogene
retro_pabe_1679,
Ictidomys tridecemlineatus ENSSTOG00000022246 ortholog_one2one 2 retrogenes
retro_itri_1228, retro_itri_1329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1677 83.97 82.80
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Download FASTA sequences of all ENSCJAG00000018575 retrocopies