Parental gene: | B4GALT6, ENSCJAG00000020816 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:69208468..69265798(-) |
>ENSCJAG00000020816
ATGTCTATGCTCAGGCGGATGATGCGGGTTTCCAATCGCTCCCTTCTCGCCTTCATCTTCTTCTTCTCCCTCTCTTCGTC
TTGTCTGTACTTCATCTATGTGGCTCCGGGTATCGCCAACACATATCTCTTTATGGTACAAGCTCGAGGTATAATGTTGA
GAGAAAATGTGAAAACAATAGGTCATATGATCAGACTATACACGAATAAAAACAGTACGCTCAACGGTACAGATTATCCT
GAAGGCAATAATTCAAGTGATTATCTTGTTCAAACAACAACGTATCTTCCGGAAAACTTCACGTATTTACCATACCTCCC
CTGTCCAGAAAAACTGCCTTACATGCGAGGATTCCTCAATGTCAATGTAAGTGAAGTCAGTTTTGATGAAATTCATCAGC
TCTTCTCCAAGGATTTAGATATCGAGCCAGGGGGTCATTGGAGGCCAAAAGACTGTAAACCCAGATGGAAGGTGGCAGTT
CTCATTCCTTTCCGTAATCGCCATGAACATCTTCCAATTTTTTTCTTACATCTGATTCCAATGCTCCAGAAACAAAGACT
GGAATTTGCCTTTTATGTCATTGAACAGACTGGCACACAACCTTTTAATCGTGCGATGCTCTTCAATGTGGGCTTCAAAG
AGGCCATGAAAGACAGTATCTGGGACTGTGTAATCTTCCACGATGTGGATCATCTACCTGAAAATGACCGGAACTATTAC
GGATGTGGAGAAATGCCACGTCATTTTGCTGCAAAGCTGGATAAATATATGTATATTCTTCCATATAAAGAGTTTTTTGG
TGGTGTAAGTGGGCTGACAGTGGAACAATTTAGAAAGATCAATGGTTTTCCTAATGCCTTCTGGGGATGGGGAGGAGAAG
ATGATGACCTTTGGAACAGAGTTCACTATGCTGGATATAATGTAACCAGACCAGAGGGAGACTTAGGAAAATACAAGTCA
ATTCCTCATCACCATAGAGGTGAAGTCCAGTTTTTAGGACGGTATAAACTACTAAGGTATTCCAAGGAGCGTCAGTACAT
CGATGGGTTGAACAATTTAATATATAGGCCAAAAATACTGGTTGATAGGTTGTATACAAACATATCTGTAAACCTCATGC
CAGAGTTAGCTCCAATTGAAGACTATTAA
ATGTCTATGCTCAGGCGGATGATGCGGGTTTCCAATCGCTCCCTTCTCGCCTTCATCTTCTTCTTCTCCCTCTCTTCGTC
TTGTCTGTACTTCATCTATGTGGCTCCGGGTATCGCCAACACATATCTCTTTATGGTACAAGCTCGAGGTATAATGTTGA
GAGAAAATGTGAAAACAATAGGTCATATGATCAGACTATACACGAATAAAAACAGTACGCTCAACGGTACAGATTATCCT
GAAGGCAATAATTCAAGTGATTATCTTGTTCAAACAACAACGTATCTTCCGGAAAACTTCACGTATTTACCATACCTCCC
CTGTCCAGAAAAACTGCCTTACATGCGAGGATTCCTCAATGTCAATGTAAGTGAAGTCAGTTTTGATGAAATTCATCAGC
TCTTCTCCAAGGATTTAGATATCGAGCCAGGGGGTCATTGGAGGCCAAAAGACTGTAAACCCAGATGGAAGGTGGCAGTT
CTCATTCCTTTCCGTAATCGCCATGAACATCTTCCAATTTTTTTCTTACATCTGATTCCAATGCTCCAGAAACAAAGACT
GGAATTTGCCTTTTATGTCATTGAACAGACTGGCACACAACCTTTTAATCGTGCGATGCTCTTCAATGTGGGCTTCAAAG
AGGCCATGAAAGACAGTATCTGGGACTGTGTAATCTTCCACGATGTGGATCATCTACCTGAAAATGACCGGAACTATTAC
GGATGTGGAGAAATGCCACGTCATTTTGCTGCAAAGCTGGATAAATATATGTATATTCTTCCATATAAAGAGTTTTTTGG
TGGTGTAAGTGGGCTGACAGTGGAACAATTTAGAAAGATCAATGGTTTTCCTAATGCCTTCTGGGGATGGGGAGGAGAAG
ATGATGACCTTTGGAACAGAGTTCACTATGCTGGATATAATGTAACCAGACCAGAGGGAGACTTAGGAAAATACAAGTCA
ATTCCTCATCACCATAGAGGTGAAGTCCAGTTTTTAGGACGGTATAAACTACTAAGGTATTCCAAGGAGCGTCAGTACAT
CGATGGGTTGAACAATTTAATATATAGGCCAAAAATACTGGTTGATAGGTTGTATACAAACATATCTGTAAACCTCATGC
CAGAGTTAGCTCCAATTGAAGACTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .53 RPM |
| SRP051959_skeletal_muscle | 0 .46 RPM |
| SRP051959_lymph_node | 13 .52 RPM |
| SRP051959_lung | 6 .83 RPM |
| SRP051959_liver | 16 .92 RPM |
| SRP051959_kidney | 3 .88 RPM |
| SRP051959_heart | 4 .95 RPM |
| SRP051959_colon | 4 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ictidomys tridecemlineatus | ENSSTOG00000010911 | ortholog_one2one | 1 retrogene | |
| Tetraodon nigroviridis | ENSTNIG00000010472 | ortholog_many2many | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000005726 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1251 | 92.57 | 77.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020816 retrocopies