Parental gene: | ARMC10, ENSCJAG00000021208 |
| Aliases: | None |
| Description: | armadillo repeat containing 10 [Source:HGNC Symbol;Acc:21706] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:71532566..71551047(+) |
>ENSCJAG00000021208
ATGGGTGGCGCCCGGGGCGTGGGCTGGGTGGCGGCGGGCCTACTCCTCGGCGCCGGCGCATGCTACTGCATTTACAGGCT
GACGCGCCGTCGGCGGCGGGGCGACCGCGGGCTCGTTCTGCGCCCCTCGCAGTCCGCAGAAGACTTAACTGATGGTTCGT
ATGACGATGTCCTGAATGCTGAACAACTTCAGAAACTCCTTTACCTACTTGAGTCAACTGAGGATCCTATAATTATTGAA
AAAGCTTTGATTACTTTGGGTAACAATGCAGCCTTTTCAGTTAACCAAGCTATTATTCGTGAATTGGGTGGTATTCCAAT
TGTTGGAAACAAAATCAACCATTCCAATCAGAGTATTAAAGAGAAAGCTTTAAATGCTCTTAACAACCTGAGTGTGAATG
TTGAAAATCAAATCAAGATAAAGATATACATCAACCAAGTCTGTGAGGATGTCTTCTCTGGTCCTCTGAACTCTGCTGTG
CAGCTGGCCGGACTGAGATTGTTGACAAACATGACTGTTACCAATGACCACCAGCACATGCTTCACAGTTATATTACAGA
CCTGTTCCAGGTGTTACTTACTGGAAATGGAAACACGAAGGTGCAAGTTTTGAAACTGCTTTTGAATTTGTCTGAAAATC
CAGCCATGACAGAAGGACTTCTTCATGCCCAAGTGGATGCGTCATTCCTATCCCTTTATGACAGCCATGTAGCAAAGGAG
ATTCTTCTTCGAGTACTTACACTATTTCAGAATATAAATAACTGCCTCAAAATAGAAGGCCATTTAGCTGTGCAGCCTAC
TTTCACTGAAGGTTCATTGTTTTTCCTGTTATATGGAGAAGAATGTGCCCAGAAAATAAGAGCTTTAGTTGATCACGATG
ATGCAGAGGTGAAGGAAAAGGTTGTAACAATAATGCCCAAAATCTAA
ATGGGTGGCGCCCGGGGCGTGGGCTGGGTGGCGGCGGGCCTACTCCTCGGCGCCGGCGCATGCTACTGCATTTACAGGCT
GACGCGCCGTCGGCGGCGGGGCGACCGCGGGCTCGTTCTGCGCCCCTCGCAGTCCGCAGAAGACTTAACTGATGGTTCGT
ATGACGATGTCCTGAATGCTGAACAACTTCAGAAACTCCTTTACCTACTTGAGTCAACTGAGGATCCTATAATTATTGAA
AAAGCTTTGATTACTTTGGGTAACAATGCAGCCTTTTCAGTTAACCAAGCTATTATTCGTGAATTGGGTGGTATTCCAAT
TGTTGGAAACAAAATCAACCATTCCAATCAGAGTATTAAAGAGAAAGCTTTAAATGCTCTTAACAACCTGAGTGTGAATG
TTGAAAATCAAATCAAGATAAAGATATACATCAACCAAGTCTGTGAGGATGTCTTCTCTGGTCCTCTGAACTCTGCTGTG
CAGCTGGCCGGACTGAGATTGTTGACAAACATGACTGTTACCAATGACCACCAGCACATGCTTCACAGTTATATTACAGA
CCTGTTCCAGGTGTTACTTACTGGAAATGGAAACACGAAGGTGCAAGTTTTGAAACTGCTTTTGAATTTGTCTGAAAATC
CAGCCATGACAGAAGGACTTCTTCATGCCCAAGTGGATGCGTCATTCCTATCCCTTTATGACAGCCATGTAGCAAAGGAG
ATTCTTCTTCGAGTACTTACACTATTTCAGAATATAAATAACTGCCTCAAAATAGAAGGCCATTTAGCTGTGCAGCCTAC
TTTCACTGAAGGTTCATTGTTTTTCCTGTTATATGGAGAAGAATGTGCCCAGAAAATAAGAGCTTTAGTTGATCACGATG
ATGCAGAGGTGAAGGAAAAGGTTGTAACAATAATGCCCAAAATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .24 RPM |
| SRP051959_skeletal_muscle | 4 .28 RPM |
| SRP051959_lymph_node | 12 .01 RPM |
| SRP051959_lung | 10 .79 RPM |
| SRP051959_liver | 7 .08 RPM |
| SRP051959_kidney | 13 .82 RPM |
| SRP051959_heart | 10 .91 RPM |
| SRP051959_colon | 8 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000004247 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000002095 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000019936 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000170632 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010160 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006088 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000038525 | ortholog_one2one | 3 retrogenes | |
| Vicugna pacos | ENSVPAG00000008914 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1758 | 85.76 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2104 | 87.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021208 retrocopies