Parental gene:

OSBPL9, ENSCJAG00000021574

Aliases:None
Description:Oxysterol-binding protein [Source:UniProtKB/TrEMBL;Acc:F6TIP2]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:86634806..86830624(+)


>ENSCJAG00000021574
ATGCTATATAGACGAGTGACGTCAGGCCGTTTGTTGTCATTGGCGGCTCCTAAGATGGCGTCCATCATGGAAGGTCCGCT
GAGCAAATGGACTAATGTGATGAAGGGCTGGCAGTACCGTTGGTTCGTGCTGGACTACAATGCAGGACTGCTCTCCTATT
ACACGTCCAAGGACAAAATGATGAGAGGCTCTCGCAGAGGATGTGTTAGACTCAGAGGAGCTGTGATTGGTATAGACGAT
GAGGACGACAGCACCTTCACAATAACTGTTGATCAGAAAACCTTCCATTTCCAGGCTCGTGATGCTGATGAGCGAGAGAA
GTGGATCCATGCCTTAGAAGAAACAATTCTTCGACACACTCTTCAGCTTCAAGGTTTGGATTCAGGATTTATTCCTAGTG
TCCAAGACTTTGACAAAAAACTTACAGAAGCTGATGCTTACCTTCAAATCTTGATTGAACAGTTAAAGCTTTTTGATGAC
AAGCTTCAAAACTGCAAAGAAGATGAACAAAGAAAGAAAATTGAAACGCTCAAAGAGACAACAAATAGCATGGTAGAATC
AATTAAACACTGCATTGTGTTGCTGCAGATTGCTAAAAGTACTATTAATCCTGTAGATGCAATATATCAACCTAGTCCTT
TGGAACCTGTGGTCAGCACAATGCCTTCCCAGACTGTATTACCTCCAGAACCTGTTCAATTGTGTAAGTCAGAGCAACGT
CCCTCTTCCCTACCAGTTGGACCTGTGTTGGCTACCTTGGGACCTCATCAGACTCCTACACCAAATAGTACAGGCAGTGG
CCATTCACCACCAAGTAGCAGTCTAACTTCTCCAAGCCATGTGAACTTGTCTCCAAATACAGTCCCAGAGTTCTCTTACT
CTAGCAGTGAAGATGAATTTTATGATGCTGATGAATTCCATCAAAGTGGTTCATCCCCAAAGCGCTTAATAGATTCTTCT
GGATCTGCCTCGGTCCTGACACACAGCAGCTCAGGAAATAGTCTAAAACGCCCAGATACCACAGAATCACTTAATTCTTC
CATGTCCAATGGAACAAGTGATGCTGACCTTTTTGATTCACATGATGATAGAGATGATGATGCGGAGGCAGGGTCCGTGG
AGGAACACAAGAGCGTTATTATGCATCTCTTGTCACAGGTTAGGCTTGGGATGGATCTTACTAAGGTAGTTCTTCCAACA
TTTATTCTTGAAAGAAGATCTCTTTTAGAAATGTATGCAGACTTTTTTGCACATCCGGACCTGTTTGTGAGCATTAGTGA
CCACAAGGATCCCAAGGATCGAATGGTTCAGGTTGTGAAATGGTACCTCTCAGCCTTTCATGCAGGAAGGAAAGGATCAG
TTGCCAAAAAGCCATATAATCCCATTTTGGGCGAGATCTTTCAGTGTCATTGGACATTACCAAATGATACGGAAGAGAAC
ACAGAACTAGTTTCAGAAGGACCAGTTCCCTGGGTTTCCAAAAACAGTGTAACATTCGTGGCTGAGCAGGTTTCCCATCA
TCCACCCATTTCAGCCTTTTATGCTGAGTGTTTTAACAAGAAGATACAATTCAATGCTCATATCTGGACCAAATCAAAAT
TCCTTGGGATGTCAATTGGGGTGCACAACATAGGGCAGGGCTGTGTCTCATGTCTTGACTACGATGAACATTACATTCTC
ACATTCCCCAACGGCTATGGAAGGTCTATCCTCACAGTGCCCTGGGTGGAATTAGGAGGAGAATGCAATATTAATTGTTC
CAAAACAGGCTATAGTGCAAATATCATCTTCCACACTAAACCCTTCTATGGGGGCAAGAAGCACAGAATTACTGCTGAGA
TTTTTTCTCCAAATGACAAGAAGTCTTTTTGCTCAATTGAAGGGGAATGGAATGGTGTGATGTATGCAAAATATGCAACA
GGGGAAAATACAGTTTTTGTAGATACCAAGAAGTTGCCTATAATCAAGAAGAAAGTGAGGAAGTTGGAAGATCAGAACGA
GTATGAATCCCGCAGCCTTTGGAAGGATGTCACTTTCAACTTAAAAATCAGAGACATTGAAGCAGCAACTGAAGCAAAGC
ACAGGCTTGAAGAAAGACAAAGAGCAGAAGCCCGAGAAAGGAAGGAAAAGGAAATTCAGTGGGAGACAAGGTTATTTCAT
GAAGATGGAGAATGTTGGGTTTATGATGAACCGTTACTGAAACGTCTTGGTGCTGCCAAGCATTAG

Library Parental gene expression (RPM)
SRP051959_spleen 69 .31 RPM
SRP051959_skeletal_muscle 27 .58 RPM
SRP051959_lymph_node 64 .65 RPM
SRP051959_lung 68 .53 RPM
SRP051959_liver 40 .05 RPM
SRP051959_kidney 92 .16 RPM
SRP051959_heart 61 .88 RPM
SRP051959_colon 42 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000010298 ortholog_one2one 1 retrogene
retro_fcat_1134,
Gorilla gorilla ENSGGOG00000004787 ortholog_one2one 1 retrogene
retro_ggor_737,
Microcebus murinus ENSMICG00000002731 ortholog_one2one 1 retrogene
retro_mmur_1035,
Myotis lucifugus ENSMLUG00000009199 ortholog_one2one 1 retrogene
retro_mluc_2149,
Nomascus leucogenys ENSNLEG00000016138 ortholog_one2one 2 retrogenes
retro_nleu_1820, retro_nleu_279,
Oryctolagus cuniculus ENSOCUG00000004303 ortholog_one2one 1 retrogene
retro_ocun_281,
Pongo abelii ENSPPYG00000001358 ortholog_one2one 2 retrogenes
retro_pabe_689, retro_pabe_787,
Pan troglodytes ENSPTRG00000000730 ortholog_one2one 1 retrogene
retro_ptro_632,
Ictidomys tridecemlineatus ENSSTOG00000000692 ortholog_one2one 1 retrogene
retro_itri_1537,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1235 93.53 94.20
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Download FASTA sequences of all ENSCJAG00000021574 retrocopies