Parental gene:

IPMK, ENSCPOG00000000222

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_15:9090365..9145497(-)


>ENSCPOG00000000222
GCCGCCCCCGAAGGCATCTCGCAGTCGGCGGCCGGCAGGCTGCGTTTCCTCAACGGCTGCGTGCCCCTCTCGCATCAGGC
CGGGCACATGTACGGGAAGGACAAAGTGGGAATACTGCAACATCCAGATGGCACAGTGTTGAAACAGTTACAGCCACCTC
CAAGGGGCCCGAGAGAGCTGGAATTTTATAATATGGTTTATGCTGCTGATTGTAGTGACGGTATTCTTCTAGAGCTACGG
AAATATTTGCCAAAATATTATGGTGTCTGGTCACCTCCCACTGCACCAAATGATTTATACCTAAAACTGGAAGATGTGAC
CCATAAATTTAATAGGCCTTGTATAATGGATGTAAAGATAGGGCGAAAAAGCTATGATCCTTTTGCCTCATCTGAGAAGA
TTCAGCAACAGGTCAGCAAGTACCCATTAATGGAAGAGATTGGATTCTTGGTGCTTGGCATGAGGGTTTATCATGTTCAT
TCTGATAGTTATGAGACACAAAACCAGCACTTTGGAAGAAGCTTAACAAAAGAAACTATAAAGGATGGCATCTCCAAGTT
TTTTCATAATGGGTTCAGCTTAAGAAAAGATGCTATTGCTGCCAGTATTGAGAAGATTGAGAAAATTCTGCAATGGTTTG
AAAGCCAGAAGCAACTTAACTTTTATGCAAGTTCTTTACTATTTGTTTATGAAGGTTCATCTCAGCCAACCACTACAAAA
TCAAATGATAGAACTTTGGCAGAAAAATTCTTGTCCAAAGGACAACTGTCAGACACAGAAGTACTGGAGTACAATAATAA
CTTTCATATGTTAAGTTCCACAGTGAATGGAAAAATAGAGTCTTCAGTAGGCAAGAACTTATCCAAGATGTATGCGCGTC
ACAGAAAAATGTATTCAAAGAAGCATCACAGTCAGACTTCACTGAAAGTTGAAAATATGGAGCAAGACAATGGATGGAAA
AGCATGTCACAAGAACATTTAAATGGAAATGTACTTTCCCAACTGGAAAAAGTTTTCTGCCATCTTCCTACTGGTTGCCA
AGAGATTGCAGAAGTAGAAGTGCGAATGATAGATTTTGCTCATGTATTTCCTAGCAACACGATAGATGAGGGATATGTTT
ATGGTTTAAAGAATTTAATTACTGTACTTCGAAATATTTTAGACAGT

Library Parental gene expression (RPM)
SRP017611_brain 4 .31 RPM
SRP017611_kidney 6 .07 RPM
SRP017611_liver 4 .31 RPM
SRP040447_lung 6 .33 RPM
SRP040447_skeletal_muscle 1 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000011011 ortholog_one2one 1 retrogene
retro_apla_14,
Erinaceus europaeus ENSEEUG00000009958 ortholog_one2one 1 retrogene
retro_eeur_110,
Homo sapiens ENSG00000151151 ortholog_one2one 2 retrogenes
retro_hsap_1244, retro_hsap_2032,
Gorilla gorilla ENSGGOG00000008790 ortholog_one2many 1 retrogene
retro_ggor_1464,
Myotis lucifugus ENSMLUG00000015030 ortholog_one2one 1 retrogene
retro_mluc_518,
Nomascus leucogenys ENSNLEG00000012319 ortholog_one2one 2 retrogenes
retro_nleu_2419, retro_nleu_2622,
Pongo abelii ENSPPYG00000002433 ortholog_one2one 3 retrogenes
retro_pabe_1035, retro_pabe_1086, retro_pabe_1689,
Pan troglodytes ENSPTRG00000002516 ortholog_one2one 2 retrogenes
retro_ptro_1351, retro_ptro_855,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_369 66.53 62.47
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Download FASTA sequences of all ENSCPOG00000000222 retrocopies