Parental gene: | IPMK, ENSPTRG00000002516 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:56526416..56607073(-) |
>ENSPTRG00000002516
ATGGCAACAGAGCCACCATCCCCCCTCCGGGTCGAGGCGCCGGGCCCCCCAGAAATGCGGACCTCACCGGCGATCGAGTC
CACCCCTGAGGGCACCCCGCAGCCGGCGGGCGGCAGACTCCGCTTCCTCAACGGCTGCGTGCCCCTCTCGCATCAGGTGG
CCGGGCACATGTACGGGAAGGACAAAGTGGGTATACTGCAACATCCAGATGGCACAGTTTTGAAACAGTTACAACCACCT
CCAAGGGGCCCAAGAGAGCTGGAATTCTATAATATGGTTTATGCTGCTGACTGTTTTGATGGTGTTCTTCTAGAGCTACG
AAAATATTTGCCAAAATATTATGGCATCTGGTCACCTCCCACTGCACCAAATGATTTATACCTAAAACTGGAAGATGTGA
CCCATAAATTTAATAAGCCCTGTATAATGGATGTAAAGATAGGGCAAAAAAGCTATGATCCTTTTGCCTCATCTGAGAAG
ATTCAGCAACAGGTCAGCAAGTACCCATTAATGGAAGAGATTGGGTTCTTGGTGCTTGGCATGAGGGTTTATCATGTTCA
TTCCGATAGCTATGAGACACAAAACCAGCATTACGGAAGAAGCTTAACAAAAGAAACTATAAAGGATGGAGTCTCCAGAT
TTTTTCATAATGGGTACTGCTTAAGAAAAGATGCTGTTGCTGCCAGTATTCAGAAGATTGAGAAAATTCTGCAGTGGTTT
GAAAACCAGAAGCAGCTTAATTTTTACGCAAGTTCATTACTCTTTGTTTATGAAGGTTCATCTCAGCCAACCACTACAAA
ATTGAATGACAGAACTTTGGCAGAAAAGTTTTTGTCCAAAGGACAACTGTCAGACACAGAAGTACTAGAGTACAATAATA
ACTTTCATGTGTTAAGTTCCACAGCTAATGGAAAAATAGAGTCTTCAGTGGGCAAAAGCTTGTCCAAGATATATGCACGT
CACAGGAAAATATATACAAAAAAGCATCACAGTCAGACTTCGTTGAAAGTTGAAAATCTGGAGCAAGACAATGGGTGGAA
AAGCATGTCACAGGAACATTTAAATGGAAATGTACTTTCCCAACTGGAAAAAGTTTTCTACCATCTTCCCACTGGTTGCC
AAGAGATTGCTGAAGTAGAAGTGCGAATGATAGATTTTGCTCATGTGTTCCCTAGCAACACAATAGATGAGGGATATGTT
TATGGGCTAAAGCATTTAATTTCTGTACTTCGAAGTATTTTAGACAATTGA
ATGGCAACAGAGCCACCATCCCCCCTCCGGGTCGAGGCGCCGGGCCCCCCAGAAATGCGGACCTCACCGGCGATCGAGTC
CACCCCTGAGGGCACCCCGCAGCCGGCGGGCGGCAGACTCCGCTTCCTCAACGGCTGCGTGCCCCTCTCGCATCAGGTGG
CCGGGCACATGTACGGGAAGGACAAAGTGGGTATACTGCAACATCCAGATGGCACAGTTTTGAAACAGTTACAACCACCT
CCAAGGGGCCCAAGAGAGCTGGAATTCTATAATATGGTTTATGCTGCTGACTGTTTTGATGGTGTTCTTCTAGAGCTACG
AAAATATTTGCCAAAATATTATGGCATCTGGTCACCTCCCACTGCACCAAATGATTTATACCTAAAACTGGAAGATGTGA
CCCATAAATTTAATAAGCCCTGTATAATGGATGTAAAGATAGGGCAAAAAAGCTATGATCCTTTTGCCTCATCTGAGAAG
ATTCAGCAACAGGTCAGCAAGTACCCATTAATGGAAGAGATTGGGTTCTTGGTGCTTGGCATGAGGGTTTATCATGTTCA
TTCCGATAGCTATGAGACACAAAACCAGCATTACGGAAGAAGCTTAACAAAAGAAACTATAAAGGATGGAGTCTCCAGAT
TTTTTCATAATGGGTACTGCTTAAGAAAAGATGCTGTTGCTGCCAGTATTCAGAAGATTGAGAAAATTCTGCAGTGGTTT
GAAAACCAGAAGCAGCTTAATTTTTACGCAAGTTCATTACTCTTTGTTTATGAAGGTTCATCTCAGCCAACCACTACAAA
ATTGAATGACAGAACTTTGGCAGAAAAGTTTTTGTCCAAAGGACAACTGTCAGACACAGAAGTACTAGAGTACAATAATA
ACTTTCATGTGTTAAGTTCCACAGCTAATGGAAAAATAGAGTCTTCAGTGGGCAAAAGCTTGTCCAAGATATATGCACGT
CACAGGAAAATATATACAAAAAAGCATCACAGTCAGACTTCGTTGAAAGTTGAAAATCTGGAGCAAGACAATGGGTGGAA
AAGCATGTCACAGGAACATTTAAATGGAAATGTACTTTCCCAACTGGAAAAAGTTTTCTACCATCTTCCCACTGGTTGCC
AAGAGATTGCTGAAGTAGAAGTGCGAATGATAGATTTTGCTCATGTGTTCCCTAGCAACACAATAGATGAGGGATATGTT
TATGGGCTAAAGCATTTAATTTCTGTACTTCGAAGTATTTTAGACAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .70 RPM |
| SRP007412_cerebellum | 5 .81 RPM |
| SRP007412_heart | 2 .86 RPM |
| SRP007412_kidney | 5 .73 RPM |
| SRP007412_liver | 4 .06 RPM |
| SRP007412_testis | 5 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anas platyrhynchos | ENSAPLG00000011011 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000000222 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000009958 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000151151 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008790 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015030 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012319 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000002433 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_855 | 91.05 | 61.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1351 | 88.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002516 retrocopies