Parental gene:

IPMK, ENSEEUG00000009958

Aliases:None
Description:inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:20739]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_5178:7504..31234(-)


>ENSEEUG00000009958
ATTCTGCAGCACCCGGATGGCACGGTACTCAAACAGTTGCAGCCACCCCCAAGGGGTCCGAGAGAGCTAGACTTCTATAA
TATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTTATACCTTAAACTGGAAGATGTGACCCACAGATTCCATAAACCCTGTATAATGGAT
GTAAAAATAGGGCGAAAAAGCTACGATCCTTTTGCCTCATCTGAGAAGATCAAGCAACAGGTCAGCAAGTACCCATTAAT
GGAAGAGATTGGCTTCTTGCTGCTTGGCATGAGGGTCTACCGTGTTCATTCTGATGACTACGAGACGAAAAACCAGCACT
ACGGAAGAAGCTTAACAAGAGAAACACTGAAGGACGGAGTCGCCAAGTTTTTTCATGATGGGTTCTGCTTACGGAAGGAT
GCCATTGCTGCCAGTATTCAGAAAGTCAAGAGCATCCTGCAGTGGTTTGAAAGCCAGCAGCAGCTGAATTTTTATGCAAG
TTCATTACTGTTTGTTTATGAAGGTTCATCTCAACCAACTACTACAAAATCAAACGACAGAACTTTAGCAGAGAAGTTTC
TGGGCAAAGGACAACTGTCAGACACGGATGTACTGGAATATAATAACAACTTTCATATGTTAAGCTCTCCGGCCAATGGA
AAAATAGAGACTCCGGTAGGCAAAAGCTTGTCCAAGATGTATGCCCGTCACAGAAAAATGTATTCAAAAAAACATCACAG
CCAGACGTCCTTGAAGGTTGAGAATACAGAGCAGGACAATGGGTGGGAAAGCATGTCACAGGAACATCTAAACGGAAATG
TCATTTCCCAGTTGGAAAAAGTTCTCTGTCATCTTCCAGCTGGTTGCCGAGAGATTGCAGAAGTCGAAGTGAGGATGATC
GATTTCGCTCATGTGTTCCCGAGCGGCACGACGGACGAGGGATACGTTTATGGGCTGAAGCATCTGATTGCCGTACTGCA
GAGTATTTTAGACAGCTGA

Library Parental gene expression (RPM)
SRP017611_liver 6 .11 RPM
SRP017611_kidney 15 .75 RPM
SRP017611_brain 16 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000011011 ortholog_one2one 1 retrogene
retro_apla_14,
Cavia porcellus ENSCPOG00000000222 ortholog_one2one 1 retrogene
retro_cpor_369,
Homo sapiens ENSG00000151151 ortholog_one2one 2 retrogenes
retro_hsap_1244, retro_hsap_2032,
Gorilla gorilla ENSGGOG00000008790 ortholog_one2many 1 retrogene
retro_ggor_1464,
Myotis lucifugus ENSMLUG00000015030 ortholog_one2one 1 retrogene
retro_mluc_518,
Nomascus leucogenys ENSNLEG00000012319 ortholog_one2one 2 retrogenes
retro_nleu_2419, retro_nleu_2622,
Pongo abelii ENSPPYG00000002433 ortholog_one2one 3 retrogenes
retro_pabe_1035, retro_pabe_1086, retro_pabe_1689,
Pan troglodytes ENSPTRG00000002516 ortholog_one2one 2 retrogenes
retro_ptro_1351, retro_ptro_855,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_110 93.33 50.57
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Download FASTA sequences of all ENSEEUG00000009958 retrocopies