Parental gene: | VRK1, ENSCPOG00000001772 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_114:1328522..1350868(+) |
>ENSCPOG00000001772
ATGCCTCGTGTCAAAGCAGCTCAAGCTGGAAGACAGGGCCCTGCAAAGAGACGTCTTGCAGAACACTTTGCAGCTGGGGA
GGTAATAACTGACCTGTCAAAAAAGGAGTGGAAGCTAGGATTGCCCATTGGCCAAGGTGGCTTTGGCCGAATATATCTTG
CTGATACAAATTCTTCAAAATCGGTTGGCAGTGATGCACCCTGTGTTGCAAAAGTGGAACCCAGTGACAATGGCCCTCTT
TTTACTGAATTAAAGTTCTACCAGAGAGCTGCTAAACCAGAGCAAATTCAGAAATGGATTCATACCCATAAACTGAAGTA
TCTTGGTGTTCCTAAGTATTGGGGATCTGGACTGCATGATAAAAATGGAAACAGTTACAGGTTTATGATAATAGATCGCT
TTGGGAGTGACCTTCAGAAAATATACGAAGCAAATGCCAAAAGGTTTTCTCGGAAAACTGTCTTGCAGCTAAGCTTAAGA
ATTCTGGATATTCTGGAATACATCCACGAGCATGAGTACGTGCATGGGGATATCAAGGCCTCAAATCTGCTTCTGAGCTA
CAAGAACCCTGACCAGGTATATTTGGTAGATTATGGCCTTGCTTATCGGTACTGCCCAGAAGGAGTTCATAGAGAATATA
AAGAGGATCCCAAAAGATGTCACGATGGCACTATTGAGTTCACCAGCATTGACGCACACCATGGCGTGGCGCCCTCGAGA
CGTGGTGATTTGGAAATACTCGGCTACTGCATGATCCAGTGGCTCAGTGGCCATCTTCCCTGGGAGGATAACTTGAAGGA
TCCAAACTATGTTAGAGATTCCAAAATTAGATATAGAGATAATATTGCAAGTTTGATGGAAAAATGTTTTCCTGAGAAAA
ATAAGCCAGGTGAAATTGCTAGGTACATGGAAGCTGTGAAATTACTGGACTACACTGAAAAGCCTCTTTATCAGAAGTTC
CGAGATATTCTTTTGCAAGGATTAAAAGCTGTAGGAAGTAAGGATGACAGCAAATTGGACTTCAGTGTCATGGAGAATGG
AAGTTTGAAAGCAAAAGCAGTAACAAAG
ATGCCTCGTGTCAAAGCAGCTCAAGCTGGAAGACAGGGCCCTGCAAAGAGACGTCTTGCAGAACACTTTGCAGCTGGGGA
GGTAATAACTGACCTGTCAAAAAAGGAGTGGAAGCTAGGATTGCCCATTGGCCAAGGTGGCTTTGGCCGAATATATCTTG
CTGATACAAATTCTTCAAAATCGGTTGGCAGTGATGCACCCTGTGTTGCAAAAGTGGAACCCAGTGACAATGGCCCTCTT
TTTACTGAATTAAAGTTCTACCAGAGAGCTGCTAAACCAGAGCAAATTCAGAAATGGATTCATACCCATAAACTGAAGTA
TCTTGGTGTTCCTAAGTATTGGGGATCTGGACTGCATGATAAAAATGGAAACAGTTACAGGTTTATGATAATAGATCGCT
TTGGGAGTGACCTTCAGAAAATATACGAAGCAAATGCCAAAAGGTTTTCTCGGAAAACTGTCTTGCAGCTAAGCTTAAGA
ATTCTGGATATTCTGGAATACATCCACGAGCATGAGTACGTGCATGGGGATATCAAGGCCTCAAATCTGCTTCTGAGCTA
CAAGAACCCTGACCAGGTATATTTGGTAGATTATGGCCTTGCTTATCGGTACTGCCCAGAAGGAGTTCATAGAGAATATA
AAGAGGATCCCAAAAGATGTCACGATGGCACTATTGAGTTCACCAGCATTGACGCACACCATGGCGTGGCGCCCTCGAGA
CGTGGTGATTTGGAAATACTCGGCTACTGCATGATCCAGTGGCTCAGTGGCCATCTTCCCTGGGAGGATAACTTGAAGGA
TCCAAACTATGTTAGAGATTCCAAAATTAGATATAGAGATAATATTGCAAGTTTGATGGAAAAATGTTTTCCTGAGAAAA
ATAAGCCAGGTGAAATTGCTAGGTACATGGAAGCTGTGAAATTACTGGACTACACTGAAAAGCCTCTTTATCAGAAGTTC
CGAGATATTCTTTTGCAAGGATTAAAAGCTGTAGGAAGTAAGGATGACAGCAAATTGGACTTCAGTGTCATGGAGAATGG
AAGTTTGAAAGCAAAAGCAGTAACAAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .31 RPM |
| SRP017611_kidney | 37 .90 RPM |
| SRP017611_brain | 9 .78 RPM |
| SRP040447_lung | 14 .48 RPM |
| SRP040447_skeletal_muscle | 1 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Danio rerio | ENSDARG00000018006 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012543 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000009110 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1214 | 50.54 | 50.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000001772 retrocopies