Parental gene: | ENSCPOG00000003374 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_6:51532196..51565188(-) |
>ENSCPOG00000003374
ATGGCGGCGGCTGCAGCGGGACCTGCAACAGCCCAACGGCTTTTCCAGAGCTTCTCAGATAATCTGATCGATGAGGACCC
CCAGGCGGCGTTAGAGAATTTAGCCATGAGCATCTTGCAGAAAACAGATTATTTCTCTTACCCGGCGTTTTCAGCTCATT
ACCAGGTCCTGCTAATTCATTTTGTAGTGGTGGTAACTAGTTTAAAGCAGATTTTCATCCTGGATTTGAAGCCTGTCTTT
AGTGCAGCCTTGCTACCAACTGCATTCTGTGACTGTCATTGTAAGTCCTATATGGTTTCACTCAAATCTAGAGTGCATGT
GAAAATGCTTCTTGATAGTGGTAGGAAAGGCATGGAATCTCATTCAGGTCTGATTTTGTTGTGTAGTGGGGAACCTCCTA
CTATAGATATATTCAGTGTTTTCTTTCTAGGTGCAGATGATAATTTTAATGTCTGGATTAAAAGGTGTCAGGAAGCACAG
AATGGTAAAAACCAAAAAGTCATCTATAACCAAAAAAAAAATAGGTATGACTGGTATCAAACAGAATCTCAAGTAATTAT
AACACTTATGATTAAGAATGTTCAGAAGAATGATGTAAATGTGGAATTTTCAGAAAAAGAGTTATTTGCTTTGGTGAAAC
TTTCTTCTGGAGAAGATTACAATTTGAAACTGAGACTGCTTCATCCTATAATACCAGAACAGAGCACATTTAGAGTACTT
TCAACAAAGATTGAAATTAAAATGAAAAAGCCAGAGGCTGTGAGATGGGAAAAGCTAGAGGGGCAAGGAGATGTGCCTGC
GTCCAAACAGTTCATAGCAGATGTAAAGAACTTATATCCATCATCATCTCATTATACAAGAAATTGGGATAAGTTGGTTG
GTGAGATCAAAGAAGAAGAAAAGAATGAGAAATTGGAGGGAGATGCAGCTTTAAACAAGTTATTTCAGCAGATCTATTCA
GATGGCTCTGATGAAGTCAAACGTGCCATGAACAAATCATTTATGGAATCTGGTGGTACAGTTTTGAGTACCAACTGGTC
TGATGTAGGTAAAAGGAAAGTTGAAATCAATCCTCCTGATGATATGGAATGGAAAAAATACTAA
ATGGCGGCGGCTGCAGCGGGACCTGCAACAGCCCAACGGCTTTTCCAGAGCTTCTCAGATAATCTGATCGATGAGGACCC
CCAGGCGGCGTTAGAGAATTTAGCCATGAGCATCTTGCAGAAAACAGATTATTTCTCTTACCCGGCGTTTTCAGCTCATT
ACCAGGTCCTGCTAATTCATTTTGTAGTGGTGGTAACTAGTTTAAAGCAGATTTTCATCCTGGATTTGAAGCCTGTCTTT
AGTGCAGCCTTGCTACCAACTGCATTCTGTGACTGTCATTGTAAGTCCTATATGGTTTCACTCAAATCTAGAGTGCATGT
GAAAATGCTTCTTGATAGTGGTAGGAAAGGCATGGAATCTCATTCAGGTCTGATTTTGTTGTGTAGTGGGGAACCTCCTA
CTATAGATATATTCAGTGTTTTCTTTCTAGGTGCAGATGATAATTTTAATGTCTGGATTAAAAGGTGTCAGGAAGCACAG
AATGGTAAAAACCAAAAAGTCATCTATAACCAAAAAAAAAATAGGTATGACTGGTATCAAACAGAATCTCAAGTAATTAT
AACACTTATGATTAAGAATGTTCAGAAGAATGATGTAAATGTGGAATTTTCAGAAAAAGAGTTATTTGCTTTGGTGAAAC
TTTCTTCTGGAGAAGATTACAATTTGAAACTGAGACTGCTTCATCCTATAATACCAGAACAGAGCACATTTAGAGTACTT
TCAACAAAGATTGAAATTAAAATGAAAAAGCCAGAGGCTGTGAGATGGGAAAAGCTAGAGGGGCAAGGAGATGTGCCTGC
GTCCAAACAGTTCATAGCAGATGTAAAGAACTTATATCCATCATCATCTCATTATACAAGAAATTGGGATAAGTTGGTTG
GTGAGATCAAAGAAGAAGAAAAGAATGAGAAATTGGAGGGAGATGCAGCTTTAAACAAGTTATTTCAGCAGATCTATTCA
GATGGCTCTGATGAAGTCAAACGTGCCATGAACAAATCATTTATGGAATCTGGTGGTACAGTTTTGAGTACCAACTGGTC
TGATGTAGGTAAAAGGAAAGTTGAAATCAATCCTCCTGATGATATGGAATGGAAAAAATACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 22 .63 RPM |
| SRP017611_kidney | 26 .49 RPM |
| SRP017611_brain | 17 .25 RPM |
| SRP040447_lung | 21 .77 RPM |
| SRP040447_skeletal_muscle | 17 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008606 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000004823 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003604 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002991 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000165416 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006797 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015700 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008220 | ortholog_many2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005906 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_110 | 90.00 | 57.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003374 retrocopies