Parental gene: | SUGT1, ENSPTRG00000005906 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 13:52301157..52336723(+) |
>ENSPTRG00000005906
ATGGCGGCGGCTGCAGCAGGAACTGCAACATCCCAGAGGTTTTTCCAGAGCTTCTCGGATGCCCTAATCGACGAGGACCC
CCAGGCGGCGTTAGAGGAGCTGACTAAGGCTTTGGAACAGAAACCAGATGATGCACAGTATTATTGTCAAAGAGCTTATT
GTCACATTCTTCTCGGGAATTACTGTGTTGCTGTTGCTGATGCAAAGAAGTCTCTAGAACTCAATCCAAATAATTCCACT
GCTATGCTGAGAAAAGGAATATGTGAATACCATGAAAAAAACTATGCTGCTGCCCTAGAAACTTTTACAGAAGGACAAAA
ATTAGATATAGAGACGGGGTTTCATCGTGTTGGCCAGGCTGGTCTCCAACTCTTGACCTCAAGTGATCCACCTGCCTTGG
ACTCCCAAAGTGCTGGGATTACAGGTGCAGATGCTAATTTCAGTGTCTGGATTAAAAGGTGTCAAGAAGCTCAGAATGGC
TCAGAATCTGAGGTGTGGACTCATCAGTCAAAAATCAAGTATGACTGGTATCAAACAGAATCTCAAGTAGTCATTACACT
TATGATCAAGAATGTTCAGAAGAATGATGTAAATGTGGAATTTTCAGAAAAAGAGTTGTCTGCTTTGGTTAAACTTCCTT
CTGGAGAGGATTACAATTTGAAACTGGAACTTCTTCATCCTATAATACCAGAACAGAGCACGTTTAAAGTACTTTCAACA
AAGATTGAAATTAAACTGAAAAAGCCAGAGGCTGTGAGATGGGAAAAGCTAGAGGGGCAAGGAGATGTGCCTACGCCAAA
ACAATTCGTAGCAGATGTAAAGAACCTATATCCATCATCATCTCCTTATACAAGAAATTGGGATAAATTGGTTGGTGAGA
TCAAAGAAGAAGAAAAGAATGAGAAGTTGGAGGGAGATGCAGCTTTAAACAGATTATTTCAGCAGATCTATTCAGATGGT
TCTGATGAAGTGAAACGTGCCATGAACAAATCCTTTATGGAGTCGGGTGGTACAGTTTTGAGTACCAACTGGTCTGATGT
AGGTAAAAGGAAAGTTGAAATCAATCCTCCTGATGATATGGAATGGAAAAAGTACTAA
ATGGCGGCGGCTGCAGCAGGAACTGCAACATCCCAGAGGTTTTTCCAGAGCTTCTCGGATGCCCTAATCGACGAGGACCC
CCAGGCGGCGTTAGAGGAGCTGACTAAGGCTTTGGAACAGAAACCAGATGATGCACAGTATTATTGTCAAAGAGCTTATT
GTCACATTCTTCTCGGGAATTACTGTGTTGCTGTTGCTGATGCAAAGAAGTCTCTAGAACTCAATCCAAATAATTCCACT
GCTATGCTGAGAAAAGGAATATGTGAATACCATGAAAAAAACTATGCTGCTGCCCTAGAAACTTTTACAGAAGGACAAAA
ATTAGATATAGAGACGGGGTTTCATCGTGTTGGCCAGGCTGGTCTCCAACTCTTGACCTCAAGTGATCCACCTGCCTTGG
ACTCCCAAAGTGCTGGGATTACAGGTGCAGATGCTAATTTCAGTGTCTGGATTAAAAGGTGTCAAGAAGCTCAGAATGGC
TCAGAATCTGAGGTGTGGACTCATCAGTCAAAAATCAAGTATGACTGGTATCAAACAGAATCTCAAGTAGTCATTACACT
TATGATCAAGAATGTTCAGAAGAATGATGTAAATGTGGAATTTTCAGAAAAAGAGTTGTCTGCTTTGGTTAAACTTCCTT
CTGGAGAGGATTACAATTTGAAACTGGAACTTCTTCATCCTATAATACCAGAACAGAGCACGTTTAAAGTACTTTCAACA
AAGATTGAAATTAAACTGAAAAAGCCAGAGGCTGTGAGATGGGAAAAGCTAGAGGGGCAAGGAGATGTGCCTACGCCAAA
ACAATTCGTAGCAGATGTAAAGAACCTATATCCATCATCATCTCCTTATACAAGAAATTGGGATAAATTGGTTGGTGAGA
TCAAAGAAGAAGAAAAGAATGAGAAGTTGGAGGGAGATGCAGCTTTAAACAGATTATTTCAGCAGATCTATTCAGATGGT
TCTGATGAAGTGAAACGTGCCATGAACAAATCCTTTATGGAGTCGGGTGGTACAGTTTTGAGTACCAACTGGTCTGATGT
AGGTAAAAGGAAAGTTGAAATCAATCCTCCTGATGATATGGAATGGAAAAAGTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .38 RPM |
| SRP007412_cerebellum | 10 .07 RPM |
| SRP007412_heart | 13 .70 RPM |
| SRP007412_kidney | 16 .76 RPM |
| SRP007412_liver | 18 .20 RPM |
| SRP007412_testis | 66 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008606 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000004823 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003604 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003374 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002991 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000165416 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006797 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015700 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008220 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1773 | 89.91 | 61.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000005906 retrocopies