Parental gene:

COQ2, ENSCPOG00000011458

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_33:5060308..5076174(+)


>ENSCPOG00000011458
ATGCTGAGCTTGTGGGGAGCCGGCCTCGTGCGCGGCTTGGGGGCCATGCCCCCGGCCTGGCAGTGGGGCTCACACGGCCG
ACCTCTGGCCCTGGCGCGTGCGGCAGGGGCGCTCGGAGCGGTGTTCGGTCTGTCTGCAGCGAAAGTGGTGAGCGCGGCGC
CCCGCCCCCTGCAGCCCTACCTGCGCCTCATGCGCCTGGACAAGCCCATAGGAACCTGGCTGTTGTATTTGCCATGTACC
TGGAGCATTGGTTTGGCAGCTGAGCCTGGGTGTTTTCCAGACTGGTACATGTTGTCTCTCTTTGCCACTGGAGCTGTTCT
GATGCGCGGAGCAGGCTGTACTATTAATGACATGTGGGACCGTGACTTCGATAAAAAGGTCACAAGAACGGCAAATCGCC
CAATAGCCGCTGGAGACATTTCAACTTTTCAGTCCTTGGTTTTTCTTGGGGGACAGCTGACCTTGGCGCTATGTGTTCTT
CTGTGTCTGAATTACTACAGCATAGCTCTGGGAGCAGCGTCGCTGGTTCTGGTCATCACCTACCCCCTGATGAAGAGAGT
CACGTACTGGCCTCAGCTAGCCTTGGGGCTGACGTTCAACTGGGGCGCGCTGCTTGGCTGGTCTGCCGTGAGGGGCTCCT
GTGACCTGTCCGTGTGCCTGCCTCTCTACTTTGCTGGGGTCATGTGGACACTGGTCTACGATACTATTTATGCCCATCAG
GACAAAAGAGATGATGCTCTGATCGGCCTCAGGTCCACGGCGCTGCTGTTCAGAGAGGACACCAAGTACTGGCTGGGCGG
CTTCAGCGTGGCCATGCTGGGGGCTCTGAGCCTGGTGGGTGCCAGCTGCGCCCAGACCCCGCCCTACTACGCTGCGCTGC
TCGCCGTCGCTGCCCACTTGGCCCACCAGATCCGCACCCTGGACATCCACAGCCCTGCAGACTGCTGGGACAAATTCAGC
TCCAACCGGACAGTGGGCATAATCCTCTTCCTGGGGATCATCCTCGGGAATTTGTGGAAAGAGAAGACAGACAAAGCAAA
GGAAAATGAAGATGGCAGAATAAAAATT

Library Parental gene expression (RPM)
SRP017611_brain 13 .23 RPM
SRP017611_kidney 29 .84 RPM
SRP017611_liver 10 .01 RPM
SRP040447_lung 16 .32 RPM
SRP040447_skeletal_muscle 16 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005006 ortholog_one2one 1 retrogene
retro_amel_1898,
Bos taurus ENSBTAG00000005744 ortholog_one2one 1 retrogene
retro_btau_1835,
Equus caballus ENSECAG00000012542 ortholog_one2one 1 retrogene
retro_ecab_432,
Myotis lucifugus ENSMLUG00000015267 ortholog_one2one 1 retrogene
retro_mluc_1776,
Mus musculus ENSMUSG00000029319 ortholog_one2one 1 retrogene
retro_mmus_2883,
Tarsius syrichta ENSTSYG00000013801 ortholog_one2one 30 retrogenes
retro_tsyr_1015, retro_tsyr_1155, retro_tsyr_1173, retro_tsyr_1180, retro_tsyr_1207, retro_tsyr_1235, retro_tsyr_1327, retro_tsyr_1335, retro_tsyr_1385, retro_tsyr_1451, retro_tsyr_1491, retro_tsyr_1646, retro_tsyr_1709, retro_tsyr_1742, retro_tsyr_2015, retro_tsyr_2062, retro_tsyr_2087, retro_tsyr_2136, retro_tsyr_2146, retro_tsyr_466, retro_tsyr_513, retro_tsyr_533, retro_tsyr_54, retro_tsyr_548, retro_tsyr_607, retro_tsyr_619, retro_tsyr_654, retro_tsyr_776, retro_tsyr_839, retro_tsyr_995,
Tursiops truncatus ENSTTRG00000005647 ortholog_one2one 1 retrogene
retro_ttru_1726,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1202 54.90 55.90
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Download FASTA sequences of all ENSCPOG00000011458 retrocopies