Parental gene:

COQ2, ENSECAG00000012542

Aliases:None
Description:coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:HGNC Symbol;Acc:25223]
Organism:Horse (Equus caballus)
Coordinates:3:53865139..53877223(+)


>ENSECAG00000012542
TTAGGAACCTGGCTGCTGTATCTGCCATGTACCTGGAGCATTGGTTTGGCCGCTGAACCAGGTTGTTTTCCAGATTGGTA
CATGTTATCCCTCTTTGGCACTGGGGCTGTTCTGATGCGTGGAGCCGGCTGCACCATTAATGACATGTGGGACCGGGACT
ACGATAAAAAGGTTACAAGAACAGCCAATCGCCCTATCGCTGCTGGAGACATTTCAACTTTTCGATCGTTTGTTTTTCTC
GGAGGTCAGCTGACCTTGGCGCTGGGCGTTCTTCTGTGTCTGAATTACTACAGTGTAGCTCTGGGAGCAGCATCCCTACT
GCTCGTCATCACCTACCCGCTGATGAAAAGAGTTACATACTGGCCTCAGTTAGCCTTGGGGTTGGCTTTTAACTGGGGAG
CGTTACTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATCCGTCTGTTTGCCTGCCTCTTTATTTTTCTGGAATTATGTGG
ACTCTAATATATGATACTATCTATGCCCATCAGGATAAGAAGGATGATGCTCTGATTGGCCTTAAGTCCACCGCACTGTG
GTTCCGCGAAGACACCAAGCAGTGGCTCAGTGGCTTCAGTGTGGCTATGGTGGGGGCGCTGAGCCTGGTGGGAGTGAGCA
GTGAGCAGACCGCGCCCTACTACGCTGCTCTGGCCGCCGTGGGAGCCCATCTGGCTCGCCAGATTTACACTCTAGACATC
CACAGACCGGAGGACTGCTGGGATAAATTTACCTCCAACCGAACAGTAGGACTAATAATTTTTTTAGGGATTGTCCTTGG
GAATCTTTGGAAACAAAAGAAGACAGATGAAACGAAGAAAAAAATAGATTATGTAATAGAAAATTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 4 .31 RPM
SRP021940_cerebellum 9 .40 RPM
SRP021940_embryo 9 .16 RPM
SRP021940_placental_villous 15 .97 RPM
SRP021940_synovial_membrane 5 .22 RPM
SRP021940_testis 6 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005006 ortholog_one2one 1 retrogene
retro_amel_1898,
Bos taurus ENSBTAG00000005744 ortholog_one2one 1 retrogene
retro_btau_1835,
Cavia porcellus ENSCPOG00000011458 ortholog_one2one 1 retrogene
retro_cpor_1202,
Myotis lucifugus ENSMLUG00000015267 ortholog_one2one 1 retrogene
retro_mluc_1776,
Mus musculus ENSMUSG00000029319 ortholog_one2one 1 retrogene
retro_mmus_2883,
Tarsius syrichta ENSTSYG00000013801 ortholog_one2one 30 retrogenes
retro_tsyr_1015, retro_tsyr_1155, retro_tsyr_1173, retro_tsyr_1180, retro_tsyr_1207, retro_tsyr_1235, retro_tsyr_1327, retro_tsyr_1335, retro_tsyr_1385, retro_tsyr_1451, retro_tsyr_1491, retro_tsyr_1646, retro_tsyr_1709, retro_tsyr_1742, retro_tsyr_2015, retro_tsyr_2062, retro_tsyr_2087, retro_tsyr_2136, retro_tsyr_2146, retro_tsyr_466, retro_tsyr_513, retro_tsyr_533, retro_tsyr_54, retro_tsyr_548, retro_tsyr_607, retro_tsyr_619, retro_tsyr_654, retro_tsyr_776, retro_tsyr_839, retro_tsyr_995,
Tursiops truncatus ENSTTRG00000005647 ortholog_one2one 1 retrogene
retro_ttru_1726,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_432 63.96 66.32
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Download FASTA sequences of all ENSECAG00000012542 retrocopies