Parental gene: | ENSCPOG00000012266 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_9:57152051..57243308(-) |
>ENSCPOG00000012266
AGACCTGGTGAAGGAAGCTACAGTAGATATTACAGTCATGTTGGTTATCGAGACTATGACGAGGGCCGCAGTTTTTCTCA
TGATCGAAGAAGTGGTCCATCTCACAGAGGAGATGAATCTGGCTATCGATGGTCAAGAGACGATCATTCTGCAAGCCGCC
AGAGTGATTACAGGGACATGAGAGATGGCTTTAGACGAAGAAGTTTCTACTCTTCCCATTATACAAGAGACCGGTCTCCT
CATACAAGGGAGCTTCCTTTTTTCCGAGAATCACCTGTAGGCCGAAAGGACTCTCCACACAGCAGATCTGGCTCCAGTGT
CAGTAGCAGAAGCTATTCTCCAGACCGAAGCAAGGCGTACTCTTTCCACCAGTCTCAGCATAGAAAGCCTGCGCGTGCCA
GTGCCTCCTACAAACGGCAGGATGAAGGAAAGCCAGAAAGAGGTAAAGAGCGACCTGTCCCATCTATGAAAACATCAAGA
GATACCTCACCTTCAAGTTCTCCAGCAGGTCCTTCATCAAAGGCATTAGATAAACCCAGCAGGCTGACTGAAAAGGAGCT
TGCTGAGGCTGCAAGCAAGTGGGCTGCGGAAAAGCTCGAGAAGTCTGAGGAGACTAATGTGCCTGGGATTTCTGAGTTCC
AGGTGGGACCTACAACACAGTTATTCATTGAGAATCCAGAGGAGACAGATACCAATGCAACCGACAGCACGGAATTATTT
GAAGACAGTCAGCTCAGCAGTCGCTCGAAAGCAATAGCATTGAAAACCAAAGAGATTGAACAGGTTTATCGACAAGACTG
CGAAACATTTGGGATGGTGGTGAAAATGCTGATTGAAAAAGATCCTTCCTTAGAAAAGTCTATACAATTTGCACTGAGGC
AAAATTTACATGAAATAGGTGAGCGCTGTGTTGAAGAACTCAAGCATTTCATTGCAGAGTATGATACTTCTACTCAAGAT
TTTGGAGAGCCTTTTTAG
AGACCTGGTGAAGGAAGCTACAGTAGATATTACAGTCATGTTGGTTATCGAGACTATGACGAGGGCCGCAGTTTTTCTCA
TGATCGAAGAAGTGGTCCATCTCACAGAGGAGATGAATCTGGCTATCGATGGTCAAGAGACGATCATTCTGCAAGCCGCC
AGAGTGATTACAGGGACATGAGAGATGGCTTTAGACGAAGAAGTTTCTACTCTTCCCATTATACAAGAGACCGGTCTCCT
CATACAAGGGAGCTTCCTTTTTTCCGAGAATCACCTGTAGGCCGAAAGGACTCTCCACACAGCAGATCTGGCTCCAGTGT
CAGTAGCAGAAGCTATTCTCCAGACCGAAGCAAGGCGTACTCTTTCCACCAGTCTCAGCATAGAAAGCCTGCGCGTGCCA
GTGCCTCCTACAAACGGCAGGATGAAGGAAAGCCAGAAAGAGGTAAAGAGCGACCTGTCCCATCTATGAAAACATCAAGA
GATACCTCACCTTCAAGTTCTCCAGCAGGTCCTTCATCAAAGGCATTAGATAAACCCAGCAGGCTGACTGAAAAGGAGCT
TGCTGAGGCTGCAAGCAAGTGGGCTGCGGAAAAGCTCGAGAAGTCTGAGGAGACTAATGTGCCTGGGATTTCTGAGTTCC
AGGTGGGACCTACAACACAGTTATTCATTGAGAATCCAGAGGAGACAGATACCAATGCAACCGACAGCACGGAATTATTT
GAAGACAGTCAGCTCAGCAGTCGCTCGAAAGCAATAGCATTGAAAACCAAAGAGATTGAACAGGTTTATCGACAAGACTG
CGAAACATTTGGGATGGTGGTGAAAATGCTGATTGAAAAAGATCCTTCCTTAGAAAAGTCTATACAATTTGCACTGAGGC
AAAATTTACATGAAATAGGTGAGCGCTGTGTTGAAGAACTCAAGCATTTCATTGCAGAGTATGATACTTCTACTCAAGAT
TTTGGAGAGCCTTTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .71 RPM |
| SRP017611_kidney | 12 .77 RPM |
| SRP017611_brain | 10 .99 RPM |
| SRP040447_lung | 13 .27 RPM |
| SRP040447_skeletal_muscle | 4 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010693 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017726 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002007 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000016067 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000036167 | ortholog_many2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004012 | ortholog_many2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010740 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_744 | 59.66 | 53.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_745 | 63.89 | 54.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000012266 retrocopies