Parental gene:

SNRPD3, ENSCPOG00000012304

Aliases:None
Description:small nuclear ribonucleoprotein D3 polypeptide 18kDa [Source:HGNC Symbol;Acc:11160]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_4:8645959..8664204(-)


>ENSCPOG00000012304
ATGTCTATTGGTGTGCCAATTAAAGTCCTGCATGAGGCGGAGGGCCACATTGTAACATGTGAGACAAACACTGGTGAAGT
CTATCGAGGGAAGCTCATTGAAGCAGAGGACAACATGAATTGCCAGATGTCCAACATCACAGTCACGTACAGAGATGGCC
GAGTGGCACAGCTGGAGCAGGTGTACATCCGTGGCAGCAAGATCCGCTTCCTGATTCTGCCTGACATGCTGAAAAATGCA
CCCATGTTAAAGAGCATGAAAAATAAAAACCAAGGCTCAGGGGCTGGCCGGGGCAAAGCTGCTATTCTGAAGGCCCAAGT
GGCTGCAAGAGGAAGAGGACGTGGAATGGGACGTGGAAATATCTTCCAGAAGCGAAGATAA

Library Parental gene expression (RPM)
SRP017611_brain 19 .38 RPM
SRP017611_kidney 39 .15 RPM
SRP017611_liver 30 .60 RPM
SRP040447_lung 32 .11 RPM
SRP040447_skeletal_muscle 44 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013864 possible_ortholog 1 retrogene
retro_cfam_173,
Dasypus novemcinctus ENSDNOG00000018004 possible_ortholog 1 retrogene
retro_dnov_2611,
Dipodomys ordii ENSDORG00000005801 ortholog_one2one 1 retrogene
retro_dord_791,
Otolemur garnettii ENSOGAG00000012708 possible_ortholog 3 retrogenes
retro_ogar_1209, retro_ogar_2077, retro_ogar_2235,
Rattus norvegicus ENSRNOG00000050410 possible_ortholog 1 retrogene
retro_rnor_232,
Ictidomys tridecemlineatus ENSSTOG00000025674 ortholog_one2one 1 retrogene
retro_itri_651,
Tarsius syrichta ENSTSYG00000007649 possible_ortholog 1 retrogene
retro_tsyr_1489,
Tursiops truncatus ENSTTRG00000006022 possible_ortholog 1 retrogene
retro_ttru_1240,
Vicugna pacos ENSVPAG00000000241 possible_ortholog 2 retrogenes
retro_vpac_338, retro_vpac_348,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_297 78.57 99.21
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Download FASTA sequences of all ENSCPOG00000012304 retrocopies