Parental gene: | ENSCPOG00000013736 |
| Aliases: | None |
| Description: | Nucleolar GTP-binding protein 1 [Source:UniProtKB/TrEMBL;Acc:H0VPF1] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_16:9167483..9192870(+) |
>ENSCPOG00000013736
ATGGCGCACTACAACTTTAAGAAGATCACGGTGGTGCCGTCCGCTAAGGACTTCATTGACCTAACATTGTCAAAGACTCA
ACGAAAGACTCCAACAGTTATTCATAAACACTATCAAATTCATCGCATTAGACATTTTTATATGAGAAAAGTCAAATTTA
CTCAGCAGAATTACCATGACAGACTCTCACAGATTTTAACAGATTTTCCCAAATTGGATGATATCCATCCATTTTATGCT
GATTTGATGAATATTCTCTATGATAAGGATCATTACAAGTTGGCTCTAGGACAAATAAATATTGCCAAAAATTTAGTGGA
CAATGTTGCTAAAGATTATGTGCGGCTAATGAAATACGGTGATTCTCTCTATCGCTGCAAGCAGCTGAAGCGCGCTGCCC
TTGGGCGGATGTGCACTATCATCAAGAGACAAAAGCAAAGTTTGGAATATTTGGAACAAGTACGTCAGCATTTATCCCGC
TTGCCAACCATTGATCCAAATACAAGGACTCTGCTTTTGTGTGGGTACCCAAATGTTGGGAAATCCAGCTTCATCAACAA
GGTGACGAGAGCAGATGTGGATGTTCAGCCATATGCATTTACTACGAAGTCTCTGTTTGTTGGGCACATGGATTATAAGT
ATCTACGTTGGCAGGTTGTAGATACTCCAGGGATTTTGGATCATCCTTTAGAGGATCGGAACACCATCGAAATGCAGGCT
ATCACCGCCCTGGCTCACCTTCGTGCCGCAATATTATATGTGATGTATTTGTCTGAGCAATGTGGACATGGATTGAAAGA
ACAGTTAGAGCTCTTCCAGAATATCAGACCCCTCTTTGTCAACAAACCTCTTATAGTTGTAGCAAACAAATGTGATGTGA
AGAGAATAGCTGAACTTCCTGAGGATGATCAGAAAATATTTATAGACTTGCAGGCCGAAGGATTCCCTGTTATAGAAACC
AGCACCCTGACTGAGGAAGGTGTTATTAAAGTTAAAACAGAGGCTTGTGATAGACTTTTGGCTCATCGAGTAGAAACCAA
AATGAAAGGAAATAAAGTGAATGAAGTGCTAAACAGATTGCATTTAGCTATACCCAACAAGAGAGATGATAAGGAGAGGC
CCCCTTTCATCCCAGAAGGAGTGGTGGCACGCAAGAAGAGAATGGACATTGGGGAACCCAAGAAGAAAAGGGAACGAGAT
CTTGAGCTGGAAATGGGAGATGATTATATTTTGGATCTTCAAAAATACTGGGATTTAATGAATTCATCTGAAAAATATGA
TAAGATACCAGAAATCTGGGAAGGCCATAATGTAGCAGATTATATTGATCCTGCTATTATGAAGAAATTGGAAGAGTTAG
AAAAAGAAGAAGAGTTGAGAACAGCTGCTGGAGAATATGACAGTGAATCTGAAAGTGAAGATGAAGAAATGTTGGAAATC
CGAGAGCTGGCAAGACAAATTAGAGAAAAAAAGAAATTGAAAATTCTACAATCAAAGGAAAAAAATACCCAGGGACCAAG
GATGCCTCGAACTGCTAAGAAGGTTCAGCGGACAGTTTTGGAGAATGAGATGCGAAGTCTTGGTATTGACATGGATGATA
AAGATAATACTCACTACGCAATCCAGGCAAGACGGTCTCGGAGCATCACTAGGAAAAGAAAGCGGGAAGACTCTGTTCCA
CCCACTTCTGTAGCCCGGAGTCGAAGTTGCTCTCGAACACCACGTGATGTTTCTGGTCTTCGAGATATGAAGATGGTGAA
GAAAGCCAAGACTATGATGAAGAATGCTCAGAAGAAGATGAATCGCTTAGGGAAGAAAGGGGAGGCAGATAGACACGTGT
TTGATATGAAACCCAAGCACTTACTCTCTGGAAAGAGGAAAGCTGGTAAAAAGGACAGAAGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 22 .95 RPM |
| SRP017611_kidney | 39 .89 RPM |
| SRP017611_liver | 22 .37 RPM |
| SRP040447_lung | 29 .66 RPM |
| SRP040447_skeletal_muscle | 24 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008494 | ortholog_many2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016217 | ortholog_many2many | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000014713 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010042 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_996 | 62.53 | 58.36 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000013736 retrocopies