Parental gene:

GTPBP4, ENSSTOG00000010042

Aliases:None
Description:GTP binding protein 4 [Source:HGNC Symbol;Acc:21535]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393294.1:13101959..13127127(-)


>ENSSTOG00000010042
ATGGCGCACTACAACTTCAAGAAGATTACGGTGGTGCCGTCCGCCAAGGACTTTATCGACCTGACATTATCGAAGACTCA
ACGAAAGACTCCAACAGTGATTCATAAACATTACCAAATTCATCGCATTAGACATTTTTATATGAGAAAAGTCAAATTTA
CTCAGCAGAATTACCATGACAGACTCTCACAGATTGTAACAGATTTTCCCAAATTGGATGATATCCATCCATTTTATGCT
GATTTGATGAATATTCTGTATGACAAAGATCATTACAAGTTGGCTCTAGGACAGATTAATATTGCCAAAAATTTAGTGGA
CAATGTTGCTAAAGATTATGTACGGCTTATGAAGTACGGCGATTCTCTCTACCGCTGTAAGCAGCTGAAGCGTGCTGCCC
TTGGGCGAATGTGCACCATTATCAAGCGGCAGAGGCAAAGTTTGGAATATCTGGAACAAGTGCGTCAGCATTTATCCCGC
TTGCCAACCATTGACCCAAATACAAGGACTCTGCTTTTGTGTGGGTACCCAAATGTTGGGAAATCCAGCTTCATTAATAA
GGTGACGAGAGCAGATGTGGATGTTCAGCCCTATGCATTTACCACCAAGTCTCTGTTTGTTGGACACATGGATTATAAGT
ATCTGCGTTGGCAGGTTGTAGATACTCCAGGGATTTTGGATCATCCTTTGGAGGATCGGAACACCATCGAAATGCAGGCT
ATCACGGCCCTGGCGCACCTTCGAGCTGCGGTTCTGTATGTGATGGACTTGTCTGAACAGTGTGGACACGGGCTGAAAGA
GCAATTAGAACTTTTCCAGAATATCAGACCTCTCTTTATCAATAAGCCTCTTATAATTGTAGCAAACAAATGTGATGTGA
AACGAATAGCTGAACTTTCTGAAGATGATCAGAAAATATTTGTAGACTTGCAAGCCGAAGGATTCCCTGTAATAGAGACC
AGTACCCTGACTGAGGAAGGTGTTATTAAAGTTAAAACAGAGGCTTGTGACAGGCTTTTGGCACACCGAGTGGAAACAAA
AATGAAAGGAAACAAAGTGAATGATGTGCTGAACAGGTTGCATTTAGCTGTGCCTAACAAGAGAGATGATAAGGAGAGGC
CCCCTTTCATCCCAGAAGGAGTAGTGGCACGCAAGAGGAGAATGGAAATTGGGGAGCCCAAGAAGAAAAGGGAACGGGAT
CTTGAGCTGGAAATGGGAGATGATTATATTTTGGATCTTCAAAAATACTGGGATTTAATGAATTCATCTGAAAAATATGA
TAAGATACCAGAGATCTGGGAAGGCCATAATGTAGCTGATTATATTGATCCTGCCATCATGAAGAAATTGGAAGAGTTAG
AAAAAGAAGAAGAGCTAAGAACAGCTGCGGGAGAGTATGATAGTGAATCTGAAAGTGAAGATGAGGAAATGATGGAAATC
AGACAGCTAGCAAAACAAATTAGAGAAAAAAAGAAGCTGAAAATCCTACAATCAAAGGAAAAGGATACACAGGGACCCAG
GATGCCTCGAACTGCTAAGAAGGTTCAGCGGACAGTTTTGGAAAATGAGATGCGTAGTCTTGGTGTTGACATGGATGATA
AAGACAATGCCCACTATGCAGTCCAGGCAAGAAAATCTCGGAGTGTTACTAGGAAGAGAAAGCGGGAAGAATCTGTTCCT
CCCTCTTCTGTAGCCCGGAGTAGGAGCTGCTCTCGACCTCCACGTGATGTTTCTGGTCTTCGGGATGTCAAGATGGTGAA
GAAAGCCAAGACTATGATGAAGAATGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAGGCAGATAGACATGTGT
TTGATATGAAGCCCAAGCACTTACTCTCTGGAAAGAGGAAAGCTGGTAAAAAGGACAGGAGATAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008494 ortholog_one2many 2 retrogenes
retro_cjac_2592, retro_cjac_992,
Cavia porcellus ENSCPOG00000013736 ortholog_one2many 1 retrogene
retro_cpor_996,
Rattus norvegicus ENSRNOG00000016217 ortholog_one2many 2 retrogenes
retro_rnor_1961, retro_rnor_2882,
Sarcophilus harrisii ENSSHAG00000014713 ortholog_one2one 1 retrogene
retro_shar_654,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1466 92.01 76.97
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Download FASTA sequences of all ENSSTOG00000010042 retrocopies