Parental gene:

RAB2B, ENSCPOG00000026575

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_13:20460310..20474195(+)


>ENSCPOG00000026575
ATGACTTATGCTTATCTCTTCAAGTACATCATCATCGGAGACACAGGAGTGGGGAAGTCATGTCTCCTCCTGCAGTTTAC
AGACAAGCGGTTCCAGCCCGTCCATGACCTCACAATAGGTGTAGAGTTTGGAGCCCGTATGGTCAACATTGATGGAAAAC
AAATCAAATTACAAATCTGGGATACGGCCGGGCAAGAATCCTTCCGTTCCATCACCCGTTCCTACTACCGGGGAGCAGCG
GGAGCACTCCTGGTGTATGACATTACAAGGCGTGAAACGTTCAACCACCTGACCTCGTGGTTAGAGGATGCACGCCAGCA
CTCCAGCTCCAACATGGTTATTATGCTGATTGGGAATAAGAGTGACTTAGAGTCCCGCAGGGATGTGAAGAGAGAGGAAG
GAGAAGCCTTTGCTAGGGAGCATGGATTGATATTCATGGAAACTTCAGCCAAAACTGCCTGCAATGTTGAAGAGGCCTTC
ATTAACACAGCCAAAGAAATCTACAGGAAGATCCAGCAGGGTTTATTCGATGTTCACAATGAGGCAAACGGTATCAAGAT
TGGGCCCCAGCAGTCAATCGCAACATCAGCCGGACCTGGCGCCTGCCCGAGGAACTCCCGCGACACAGGGTCTGACTCTG
GCTGCTGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 17 .31 RPM
SRP017611_kidney 4 .61 RPM
SRP017611_liver 5 .05 RPM
SRP040447_lung 15 .01 RPM
SRP040447_skeletal_muscle 3 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000044207 ortholog_one2one 1 retrogene
retro_btau_991,
Canis familiaris ENSCAFG00000005641 ortholog_one2one 1 retrogene
retro_cfam_1510,
Choloepus hoffmanni ENSCHOG00000000710 ortholog_one2one 3 retrogenes
retro_chof_2314, retro_chof_706, retro_chof_900,
Cavia porcellus ENSCPOG00000006688 other_paralog 1 retrogene
retro_cpor_1081,
Macropus eugenii ENSMEUG00000010489 ortholog_one2one 2 retrogenes
retro_meug_2160, retro_meug_91,
Myotis lucifugus ENSMLUG00000001902 ortholog_one2one 3 retrogenes
retro_mluc_1243, retro_mluc_1251, retro_mluc_2103,
Sorex araneus ENSSARG00000004969 ortholog_one2one 1 retrogene
retro_sara_97,
Ictidomys tridecemlineatus ENSSTOG00000001886 ortholog_one2one 1 retrogene
retro_itri_468,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_839 69.18 71.30
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Download FASTA sequences of all ENSCPOG00000026575 retrocopies