Parental gene: | TIPIN, ENSDNOG00000003177 |
| Aliases: | None |
| Description: | TIMELESS interacting protein [Source:HGNC Symbol;Acc:30750] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_5385:236142..239808(-) |
>ENSDNOG00000003177
ATGGTGGAACCACAGGAGAACAGCTTGATTGACCTGCAAGATTATGAACATGTAGAAGATGAAACTTTTCCTCCTTTTCC
ACCTCCAGCCTCTCCAGAGAGAGAAGATGGTGAAGGTGCTGAACCTGATGATGAGTCAGGGAGGGGAGCACCTGTTCCTG
TACCTCCAAAAAGAACTGTTAAAAGGAATATACCCAAATTGGATGCTCAGAGATTAATTTCAGAGAGAGGGCTTCCAGCC
TTAAGGCATGTGTTTGATAAAGCAAAATTCAAAGGTAGGGGTCATGAGGCTGAAGACTTAAAGACGCTGATCAGACACAT
GGAGCATTGGGCACATAGACTATTCCCTAAACTGCAATTTGAGGATTTTATTAACAGAGTTGAATACCTGGGAAATAAAA
AGGAGGTTCAGACTTGTTTAAAACGAATTCGACTTGATCTCCCAGTTTTACATGACGATTTTATTAGCAATAAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .92 RPM |
| SRP012922_cerebellum | 8 .25 RPM |
| SRP012922_heart | 3 .94 RPM |
| SRP012922_kidney | 1 .10 RPM |
| SRP012922_liver | 2 .17 RPM |
| SRP012922_lung | 5 .96 RPM |
| SRP012922_quadricep_muscle | 1 .38 RPM |
| SRP012922_spleen | 7 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004860 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000075131 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000061 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000026016 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000004386 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003695 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012909 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007192 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000043068 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_410 | 73.79 | 63.92 | Please wait, loading  |
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| 2. | retro_dnov_1334 | 86.59 | 51.27 | Please wait, loading |
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| 3. | retro_dnov_1481 | 91.78 | 91.77 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000003177 retrocopies