Parental gene:

ENSRNOG00000043068

Aliases:Tipin, RGD1564084
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:8:69463019..69477177(+)


>ENSRNOG00000043068
TCAGGGAGTGGAGCACCTGTTCCTGTTCCGCCAAAGAGAATAGTTAAAAGGAATATACCCAAGCTAGATGCTACAAGATT
GACTTCAGAGAGAGGGCTTCCAGCCTTAAGGCATGTATTTGATAAGACAAAATTCAAGGGGAAAGGTCATGAGGCTGAAG
ACTTGAAAACGCTAATCAGACACATGGAGCACTGGGCCCATAGGCTATTCCCCAAACTGCAATTTGAAGATTTTATTGAC
AGAGTTGAAAACCTAGGAAATAAAAAGGAGGTTCAGACCTGTTTAAAACGAATTCGACTTGATCTGCCTATTGTACATGA
AGATTTTGTTAACAATAACGATGAAGTTGAGGAAACTAACAGCCTTGATGCAGCTGCCACTGGATTTGATGCCTTTGTGA
CAAGTTCATCTGACAGCAAGAGGTTTGCTTCTGAAGCGAGTAGAAACCTAACAGAAGAGCAGCAGCAGAGAATTGAGAAA
AATAAACAACTGGCCTTGGAAAGAAGGCAGGCAAAGCTATTGAGTAATAGCCAGTCCCTAGAAAATGAAATTTTCCTAAA
TACAAACGTGACAGTTGAAGAGAGCAGTACTGGTGAGAATCAAGAAGAGTCAAATGGATTGATCTCTGCTGATGGTCCAC
ATGACGTTCCTTCTGCCAGCACACAGGAAGAAGGACAGTTGGAAGCAGAGGAAACACAGCTGGACCATCCT

Library Parental gene expression (RPM)
SRP017611_brain 0 .65 RPM
SRP017611_kidney 1 .81 RPM
SRP017611_liver 0 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004860 ortholog_one2many 1 retrogene
retro_chof_223,
Dasypus novemcinctus ENSDNOG00000003177 ortholog_one2many 3 retrogenes
retro_dnov_1334, retro_dnov_1481, retro_dnov_410,
Homo sapiens ENSG00000075131 ortholog_one2many 1 retrogene
retro_hsap_4837,
Gorilla gorilla ENSGGOG00000000061 ortholog_one2many 3 retrogenes
retro_ggor_1268, retro_ggor_2907, retro_ggor_3016,
Loxodonta africana ENSLAFG00000026016 ortholog_one2many 1 retrogene
retro_lafr_1104,
Microcebus murinus ENSMICG00000004386 ortholog_one2many 2 retrogenes
retro_mmur_155, retro_mmur_255,
Macaca mulatta ENSMMUG00000003695 ortholog_many2many 1 retrogene
retro_mmul_1582,
Nomascus leucogenys ENSNLEG00000012909 ortholog_one2many 1 retrogene
retro_nleu_1336,
Pan troglodytes ENSPTRG00000007192 ortholog_one2many 2 retrogenes
retro_ptro_1145, retro_ptro_3220,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_364 89.27 86.50
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Download FASTA sequences of all ENSRNOG00000043068 retrocopies