Parental gene: | ELL2, ENSDNOG00000005103 |
| Aliases: | None |
| Description: | elongation factor, RNA polymerase II, 2 [Source:HGNC Symbol;Acc:17064] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2276:30681..146772(-) |
>ENSDNOG00000005103
ATGGCGGCGGGGGGGGCGGCCGGCCTGCGGGAGGAGCAGCGCTACGGGCTGTCGTGCGGGCGGCTGGGGCAGGACCACAT
CACCGTACTGCATGTGAAGCTCACTGAGACGGCGATCCGGGCGCTCGAGACCTACCAGAGCCACAAGAATTTAATTCCTT
TCCGACCTTCAATTCAGTTCCAAGGGCTCCAAGGGCGTGTCAAAATTCCCAAATATGATCCCCCCAATGAAGTGCATAAC
TTTAACTTCTATTTGTCAAATGTGGGTAAAGACAACCCTCAAGGCAGCTTTGACTGCATCCAGCAAACATTCTCCAGCTC
TGGAGCCTCCCAGCTCAATTGCCTGGGATTTATACAAGATAAAATTACAGTTTGTGCAACAAACGACTCGTATCAGATGA
CACGAGAAAGAATGACCCAGGCAGAGGAGGAATCCCGCAACCGTAGCACAAAAGTTATCAAACCTGGTGGACCATATGTA
GGGAAAAGAGTGCAGATTCGGAAAGCACCTCAAGCTGTTTCAGATGCAGTGCCTGAGAGGAAAAGGTCAACTCCCATGAA
CCCTGCAAATACGATTCGAAAGACACACAGCAGCAGCAGTGTTTCTCAGCGGCCATATAGGGACAGAGTGATTCACTTAC
TGGCACTGAAGGCCTACAAGAAACCTGAGCTGCTTGCTCGATTGCAGAAAGATGGTGTCAATCAAAAAGACAAGAACTCC
CTCGGAGCAATTCTGCAACAGGTAGCCAATCTGAATCCTAAGGACCTCTCATATACCTTAAAGGATTATGTTTTTAAAGA
GCTTCAAAGAGACTGGCCTGGATATAGTGATATAGACAGACGGTCATTGGAATCAGTGCTCTCTAGAAAACTAAATCCAT
CTCAGAATACTGCTGGCACCAGCCGTTCAGAATCTCCCCTATGTTCTAGTAGAGACACTGCATCTTCTCCTTCTCAGAAA
CGGCTTTTGGATTCAGATTTCATTGATCCTTTAATGAATAAAAAAGCTCGAATATCTCACCTTACGAATAGAGTACCGCC
AACATTAAATGGTCATTTGAATCCCACCAGTGAAAAGTCTGCTGCAAGTCTCCCACTGCCCCCTGCAGCTGCTGCAATTC
CCACCCCTCCACCGCTGCCGTCAACCCACCTCCCTGTCTCAAATCCTCCTCAGACTGTAAATTCTAACTCCAATTCCCCT
AGCACTCCAGAAGGCCGGGGGACTCAAGACCTACCTGTTGACAGTTTTAGTCAAAATGGTAGTATCTATGAGGACCAGCA
AGACAAGTATACCTCTAGGACTTCTCTGGAAACCTTAGCCCCTGATTCAGTTCTACTGAAGTGTCCAAAGCCTATAGAAG
AAAACCATTCACTATCTCACAAAAAGTCCCAAAAGAAATCTAAACACAAGGAAAAGGACCAAATTAAAAAGCATGACATT
GAGACTGTTGAGGATAAGGAGGAGGACCTTAAAAGAGAAGAAGAAATTGCCAAGCTAAATAACTCTGGTCCAAATTCCAG
TGAAGGAGTTAAAGAGAGTTGTGCTGCCTCCACAGAGCCTTCTTCAACAATTGAACTCCCAGATTATTTGATAAAATATA
TTGGTTTTTTTTCTTATGAACAACTCCAGAATTACAAGGATGACTTCAGTGCTGAGTATGAGGAGTACAGGGCCTTACAT
GCGAGGATGGAGACTGGAGCTAGAAGATTTATCAAACTGGATGTGCAACTAAAGCACTTTTCTCTGGGCTCAAAAAAGTA
TCAGAATATTCATGAAGAAGCTTTACAAGAACAGAAGATCACGCAGTTTAGTCCCAGTTACCATGAGGAAAAATATAGAT
GTGAATATCTTCATAACAAGCTGGCTCACATCAAAAGACTAATAGGTGAATTTGACCAACAGCAAGCAGAGTCATGGCAC
TAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 23 .34 RPM |
| SRP012922_cerebellum | 5 .36 RPM |
| SRP012922_heart | 1 .62 RPM |
| SRP012922_kidney | 12 .87 RPM |
| SRP012922_liver | 26 .78 RPM |
| SRP012922_lung | 9 .32 RPM |
| SRP012922_quadricep_muscle | 4 .33 RPM |
| SRP012922_spleen | 28 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010607 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000022933 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000118985 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014192 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015647 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017090 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1413 | 76.00 | 65.78 | Please wait, loading  |
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Download FASTA sequences of all ENSDNOG00000005103 retrocopies