Parental gene:

ELL2, ENSPPYG00000015647

Aliases:None
Description:elongation factor, RNA polymerase II, 2 [Source:HGNC Symbol;Acc:17064]
Organism:Orangutan (Pongo abelii)
Coordinates:5:96572700..96650249(-)


>ENSPPYG00000015647
ATGGCGGCGGGGGGGGCAGCGGGCCTGCGGGAGGAGCAGCGCTATGGGCTGTCGTGCGGACGGCTGGGGCAGGACAACAT
CACCGTACTGCATGTGAAGCTCACCGAGACGGCGATCCGGGCGCTCGAGACTTACCAGAGCCACAAGAATTTAATTCCTT
TTCGACCTTCAATTCAGTTCCAAGGACTCCACGGGCTTGTCAAAATTCCCAAAAATGATCCCCTCAATGAAGTTCATAAC
TTTAACTTTTATTTGTCAAATGTGGGCAAAGACAACCCTCAGGGCAGCTTTGACTGCATCCAGCAAACATTCTCCAGCTC
TGGAGCCTCCCAGCTCAATTGCCTGGGATTTATACAAGATAAAATTACAGTGTGTGCAACAAACGACTCGTATCAGATGA
CACGAGAAAGAATGACCCAGGCAGAGGAGGAATCCCGCAACCGAAGCACAAAAGTTATCAAACCCGGTGGACCATATGTA
GGGAAAAGAGTGCAAATTCGGAAAGCACCTCAAGCTGTTTCAGATACAGTTCCTGAGAGGAAAAGGTCAACCCCCATGAA
CCCTGCAAATACAATTCGAAAGACACATAGCAGCAGCACCGTCTCTCAGAGGCCATACAGGGACAGGGTGATTCACTTAC
TGGCCCTGAAGGCCTACAAGAAACCAGAGCTACTTGCTAGACTCCAGAAAGATGGTGTCAATCAAAAAGACAAGAACTCC
CTGGGAGCAATTCTGCAACAGGTAGCCAATCTGAATCCTAAGGACCTCTCATATACCTTAAAGGATTATGTTTTTAAAGA
GCTTCAAAGAGACTGGCCTGGATACAGTGAAATAGACAGACGGTCATTAGAGTCAGTGCTCTCTAGAAAACTAAATCCAT
CTCAGAATGCTGCAGGCACCAGCCGTTCAGAATCTCCTGTATGTTCTAGTAGAGACGCTGTAACTTCTCCTCAGAAACGG
CTTTTGGATTCAGAGTTTATTGATCCTTTAATGAATAAAAAAGCCCGAATATCTCACCTGACGAACAGAGTACCACCAAC
ACTAAATGGTCATTTGAATCCCACCAGTGAAAAATCTGCTGTAGGCCTCCCGCTGCCCCCTGCAGCTGCTGCCATCCCCA
CCCCTCCACCGCTGCCTTCAACCTATCTGCCCGTCTCACATCCTCCTCAGATTGTAAATTCTAACTCCAATTCCCCTAGC
ACTCCAGAAGGCCGGGGGACTCAAGACCTACCTGTTGACAGTTTTAGTCAAAACGATAGTATCTATGAGGACCAGCAAGA
CAAATATACCTCTAGGACTTCTCTGGAAACCTTACCCCCTGGTTCAGTTCTACTAAAGTGTCCAAAGCCTATGGAAGAAA
ACCATTCAATGTCTCACAAAAAGTCCAAAAAGAAGTCTAAAAAACATAAGGAAAAGGACCAAATAAAAAAGCACGACATT
GAGACTATTGAGGAAAAGGAGGAAGATCTTAAGAGAGAAGAGGAAATTGCCAAGCTAAATAACTCCAGTCCAAATTCCAG
TGGAGGAGTTAAAGAGGATTGCACTGCCTCCATGGAACCTTCAGCAATTGAACTCCCAGATTATTTGATAAAATATATCG
CTATCGTCTCCTATGAGCAACGCCAGAATTATAAGGATGACTTCAATGCAGAGTATGATGAGTACAGAGCTTTGCATGCC
AGGATGGAGACTGTAGCTAGAAGATTTATCAAACTAGATGCACAAAGAAAGCGCCTTTCTCCAGGCTCAAAAGAGTATCA
GAATGTTCATGAAGAAGTCTTACAAGAATATCAGAAGATAAAGCAGTCTAGTCCCAATTACCATGAAGAAAAATACAGAT
GTGAATATCTTCATAACAAGCTGGCTCACATCAAAAGGCTAATAGGTGAATTTGACCAACAGCAAGCAGAGTCATGGCCC
TAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .06 RPM
SRP007412_cerebellum 12 .40 RPM
SRP007412_heart 24 .62 RPM
SRP007412_kidney 26 .35 RPM
SRP007412_liver 88 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010607 ortholog_one2many 1 retrogene
retro_amel_651,
Dasypus novemcinctus ENSDNOG00000005103 ortholog_one2many 1 retrogene
retro_dnov_1413,
Equus caballus ENSECAG00000022933 ortholog_one2many 1 retrogene
retro_ecab_1092,
Homo sapiens ENSG00000118985 ortholog_one2one 1 retrogene
retro_hsap_459,
Nomascus leucogenys ENSNLEG00000014192 ortholog_one2many 1 retrogene
retro_nleu_881,
Pan troglodytes ENSPTRG00000017090 ortholog_one2one 1 retrogene
retro_ptro_346,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1757 90.89 66.41
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Download FASTA sequences of all ENSPPYG00000015647 retrocopies