Parental gene:

SLC25A4, ENSDNOG00000007258

Aliases:None
Description:solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:HGNC Symbol;Acc:10990]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_13205:3176..6622(-)


>ENSDNOG00000007258
ATGAGCGACCAGGCGCTGAGCTTCCTAGAGGACTTCCTGGCGGGCGGCGTAGCCGCCGCCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCAGCATGCCAGCAAGCAGATCACGGCCGAGAAGCAGTACAAAGGGA
TCATCGACTGCGTGGTGAGGATCCCCAAGGAGCAGGGCTTCCTCTCCTTCTGGAGGGGGACCCTGGCCAACGTCATCCGC
TACTTCCCCACCCAAGCCATCAACTGGGCGTTCAAGGACAAGTACAAGCAGATCTTCCTGGGTGGCGTGGACCGACATAA
GCAGTTCTGGCGCTACTTCGCCGGGAACCTGGCTTCCGGCGGGGCGGCCGGGGCCACCTCCCTCTGCATTGTCTACCCGC
TAGACTTCGCCAGAACCAGGCTGGCTGCCGACGTGGGCAAGGGGGCCGCCCAGCGTGAGTTCAGCGGCCTGGGCAACTGC
CTAACCAAGATCTTCAAGTCGGACGGGCTGCGCGGCCTCTACCAGGGCTTCAACGTGTCCGTGCAAGGCATCATCATCTA
CAGGGCCGCCTACTTCGGGGTCTACGACACTGCCAAGGGGATGCTGCCTGACCCCAAGAACGTGCACATCATCGTGAGCT
GGATGATTGCGCAGACCGTGACGGCGGTTGCGGGGCTGGTGTCCTACCCCTTTGACACTGTTCGCCGTAGGATGATGATG
CAGTCCGGCCGGAAAGGGGCTGATATTATGTACTCTGGGACAGTTGACTGCTGGAGGAAGATTGCAAAAGATGAAGGAGC
CAAAGCGTTCTTCAAAGGTGCCTGGTCCAATGTGCTGAGAGGCATGGGTGGTGCTTTTGTGCCGGTGTTGTATGATGAGA
TCAAGAAATTTGTCTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 14 .20 RPM
SRP012922_cerebellum 58 .84 RPM
SRP012922_heart 2239 .10 RPM
SRP012922_kidney 321 .16 RPM
SRP012922_liver 0 .46 RPM
SRP012922_lung 11 .91 RPM
SRP012922_quadricep_muscle 2749 .62 RPM
SRP012922_spleen 5 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013208 ortholog_one2one 1 retrogene
retro_btau_1592,
Choloepus hoffmanni ENSCHOG00000010542 ortholog_one2one 3 retrogenes
retro_chof_1117, retro_chof_1777, retro_chof_807,
Dasypus novemcinctus ENSDNOG00000008384 within_species_paralog 1 retrogene
retro_dnov_1894,
Dipodomys ordii ENSDORG00000013787 ortholog_one2one 1 retrogene
retro_dord_268,
Erinaceus europaeus ENSEEUG00000001021 ortholog_one2one 2 retrogenes
retro_eeur_274, retro_eeur_36,
Macropus eugenii ENSMEUG00000008508 ortholog_one2one 4 retrogenes
retro_meug_222, retro_meug_549, retro_meug_6, retro_meug_921,
Microcebus murinus ENSMICG00000010865 ortholog_one2one 1 retrogene
retro_mmur_1356,
Oryctolagus cuniculus ENSOCUG00000002594 ortholog_one2many 1 retrogene
retro_ocun_102,
Ochotona princeps ENSOPRG00000005957 ortholog_one2one 6 retrogenes
retro_opri_1154, retro_opri_146, retro_opri_377, retro_opri_517, retro_opri_543, retro_opri_685,
Pan troglodytes ENSPTRG00000016646 ortholog_one2one 9 retrogenes
retro_ptro_146, retro_ptro_1588, retro_ptro_2143, retro_ptro_2364, retro_ptro_2388, retro_ptro_2517, retro_ptro_2525, retro_ptro_2819, retro_ptro_2882,
Pteropus vampyrus ENSPVAG00000015279 ortholog_one2one 1 retrogene
retro_pvam_892,
Sarcophilus harrisii ENSSHAG00000000932 ortholog_one2one 1 retrogene
retro_shar_160,
Tarsius syrichta ENSTSYG00000004233 ortholog_one2one 1 retrogene
retro_tsyr_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_390 61.61 74.50
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2. retro_dnov_1531 67.92 87.25
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3. retro_dnov_1800 64.57 84.56
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Download FASTA sequences of all ENSDNOG00000007258 retrocopies