Parental gene: | SLC25A4, ENSPTRG00000016646 |
| Aliases: | None |
| Description: | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:HGNC Symbol;Acc:10990] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 4:188485964..188489574(+) |
>ENSPTRG00000016646
CTGGGTGATCACGGCTGGGGTTTCTTAGACTTTTTTGCCGGGGGCGTCGCCGCTGCCGTCTCCAAGACTGCAGTCGCCCC
CATCGAGAGGGTCAAACTGCTGCTGCAGGTCCAGCATGCCAGCAAACAGATCAGTGCTGAGAAGCAGTACAAAGGGATCA
TTGATTGTGTGGTGAGAATCCCTAAGGAGCAGGGCTTCCTCTCCTTCTGGAGGGGTAACCTGGCCAACGTGATCCGTTAC
TTCCCCACCCAAGCTCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGCTCTTCTTAGGGGGTGTGGATCGGCATAAGCA
GTTCTGGCGCTACTTTGCTGGTAACCTGGCGTCCGGTGGGGCCGCTGGGGCCACCTCCCTTTGCTTTGTCTACCCGCTGG
ACTTTGCTAGGACCAGGTTGGCTGCTGACGTGGGCAAGGGCGCCGCCCAGCGTGAGTTCCATGGTCTGGGCGACTGTATC
ATCAAGATCTTCAAGTCTGATGGCCTGAGGGGGCTCTACCAGGGTTTCAACGTCTCTGTCCAAGGCATCATTATCTATAG
AGCTGCCTACTTCGGAGTCTATGATACTGCCAAGGGGATGCTGCCTGACCCCAAGAATGTGCACATTTTTGTGAGCTGGA
TGATTGCCCAGAGTGTGACGGCAGTCGCAGGGCTGGTGTCCTACCCCTTTGACACTGTTCGTCGTAGAATGATGATGCAG
TCCGGCCGGAAGGGGGCCGATATTATGTACACGGGGACAGTTGACTGCTGGAGGAAGATTGCAAAAGACGAAGGAGCCAA
GGCCTTCTTCAAAGGTGCCTGGTCCAATGTGCTGAGAGGCATGGGCGGTGCTTTTGTATTGGTGTTGTATGATGAGATCA
AAAAATATGTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 104 .55 RPM |
| SRP007412_cerebellum | 87 .54 RPM |
| SRP007412_heart | 955 .76 RPM |
| SRP007412_kidney | 81 .91 RPM |
| SRP007412_liver | 50 .80 RPM |
| SRP007412_testis | 8 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013208 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000010542 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000007258 | ortholog_one2one | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000013787 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000001021 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000008508 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000010865 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002594 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005957 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015279 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000000932 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004233 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_146 | 63.20 | 83.16 | Please wait, loading  |
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| 2. | retro_ptro_1588 | 78.75 | 96.63 | Please wait, loading |
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| 3. | retro_ptro_2143 | 61.56 | 96.63 | Please wait, loading |
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| 4. | retro_ptro_2364 | 76.47 | 96.63 | Please wait, loading |
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| 5. | retro_ptro_2388 | 74.30 | 83.50 | Please wait, loading |
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| 6. | retro_ptro_2517 | 76.70 | 69.36 | Please wait, loading |
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| 7. | retro_ptro_2525 | 78.28 | 96.63 | Please wait, loading |
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| 8. | retro_ptro_2819 | 74.56 | 95.96 | Please wait, loading |
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| 9. | retro_ptro_2882 | 75.00 | 96.63 | Please wait, loading |
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Download FASTA sequences of all ENSPTRG00000016646 retrocopies