Parental gene: | SLC25A4, ENSOPRG00000005957 |
| Aliases: | None |
| Description: | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:HGNC Symbol;Acc:10990] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_4057:158967..162390(+) |
>ENSOPRG00000005957
ATGAGTGATCAGGCATTGAGCTTCCTGAAGGACTTCCTGGCAGGTGGCATCGCCGCTGCCGTCTCCAAGACTGCGGTGGC
CCCCATCGAGAGGGTCAAACTGCTGCTGCAGGTCCAGCATGCCAGCAAACAGATCAGTGCTGAGAAACAGTACAAAGGGA
TCATTGATTGCGTGGTGAGAATCCCCAAGGAGCAGGGCTTCCTCTCCTTCTGGAGGGGTAACCTGGCCAACGTGATCCGC
TACTTCCCCACCCAAGCGCTCAACTTCGCATTCAAGGACAAGTACAAGCAGATCTTCCTGGGGGGCGTGGATCGGCATAA
GCAGTTCTGGCGCTACTTCGCTGGTAACCTGGCTTCTGGTGGGGCAGCTGGGGCCACCTCCCTCTGCTTTGTCTATCCAC
TGGACTTTGCCAGGACCAGGTTGGCTGCCGACGTGGGCAAGGGTGCCTCCCAGCGTGAGTTCAGTGGTCTGGGCGACTGT
CTCACCAAGATCTTCAAGTCTGATGGCCTGAAGGGTCTCTACCAGGGGTTCAGTGTCTCTGTCCAGGGCATCATTATCTA
CAGAGCTGCCTACTTCGGAGTCTATGATACTGCCAAGGGGATGCTGCCTGACCCCAAGAACGTGCACATTATTGTGAGCT
GGATGATTGCCCAGAGTGTGACAGCCGTCGCAGGGCTGGTGTCCTATCCCTTTGACACTGTCCGTCGTAGGATGATGATG
CAGTCTGGCCGGAAAGGGGCTGACATTATGTACACGGGGACAGTTGACTGCTGGAGGAAGATTGCCAAAGATGAAGGCGC
CAAGGCTTTCTTCAAAGGTGCCTGGTCCAATGTGCTGAGAGGCATGGGTGGTGCTTTTGTATTGGTGTTGTATGATGAGA
TCAAAAAATATGTCTAA
ATGAGTGATCAGGCATTGAGCTTCCTGAAGGACTTCCTGGCAGGTGGCATCGCCGCTGCCGTCTCCAAGACTGCGGTGGC
CCCCATCGAGAGGGTCAAACTGCTGCTGCAGGTCCAGCATGCCAGCAAACAGATCAGTGCTGAGAAACAGTACAAAGGGA
TCATTGATTGCGTGGTGAGAATCCCCAAGGAGCAGGGCTTCCTCTCCTTCTGGAGGGGTAACCTGGCCAACGTGATCCGC
TACTTCCCCACCCAAGCGCTCAACTTCGCATTCAAGGACAAGTACAAGCAGATCTTCCTGGGGGGCGTGGATCGGCATAA
GCAGTTCTGGCGCTACTTCGCTGGTAACCTGGCTTCTGGTGGGGCAGCTGGGGCCACCTCCCTCTGCTTTGTCTATCCAC
TGGACTTTGCCAGGACCAGGTTGGCTGCCGACGTGGGCAAGGGTGCCTCCCAGCGTGAGTTCAGTGGTCTGGGCGACTGT
CTCACCAAGATCTTCAAGTCTGATGGCCTGAAGGGTCTCTACCAGGGGTTCAGTGTCTCTGTCCAGGGCATCATTATCTA
CAGAGCTGCCTACTTCGGAGTCTATGATACTGCCAAGGGGATGCTGCCTGACCCCAAGAACGTGCACATTATTGTGAGCT
GGATGATTGCCCAGAGTGTGACAGCCGTCGCAGGGCTGGTGTCCTATCCCTTTGACACTGTCCGTCGTAGGATGATGATG
CAGTCTGGCCGGAAAGGGGCTGACATTATGTACACGGGGACAGTTGACTGCTGGAGGAAGATTGCCAAAGATGAAGGCGC
CAAGGCTTTCTTCAAAGGTGCCTGGTCCAATGTGCTGAGAGGCATGGGTGGTGCTTTTGTATTGGTGTTGTATGATGAGA
TCAAAAAATATGTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013208 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000010542 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000007258 | ortholog_one2one | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000013787 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000001021 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000008508 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000010865 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002594 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000004154 | within_species_paralog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000016646 | ortholog_one2one | 9 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015279 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000000932 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004233 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_146 | 71.30 | 74.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_377 | 63.87 | 63.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_517 | 85.15 | 76.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_543 | 85.41 | 93.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_685 | 80.54 | 99.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_opri_1154 | 71.30 | 74.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000005957 retrocopies