Parental gene: | EIF4A2, ENSDNOG00000011502 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 4A2 [Source:HGNC Symbol;Acc:3284] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1986:116239..122191(+) |
>ENSDNOG00000011502
ATGTCTGGTGGCTCTGCGGATTACAACAGAGAACATGGCGGCCCAGAGGGAATGGACCCCGATGGTGTCATCGAGAGCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGAGCTATTATTCCCTGTATTAAAGGGTATGATGTGATTGCTCAAGCTCAGTCAGGT
ACTGGCAAGACAGCCACATTTGCTATTTCCATCCTGCAACAGTTGGAGATTGAGTTCAAGGAGACCCAAGCACTAGTATT
GGCCCCCACCAGAGAACTGGCTCAACAGATACAAAAGGTAATTCTGGCTCTTGGAGACTATATGGGAGCAACTTGTCATG
CCTGCATTGGTGGAACCAATGTTCGAAATGAAATGCAAAAATTGCAGGCAGAAGCACCACATATTGTTGTTGGTACACCG
GGCAGAGTGTTTGATATGTTGAACAGAAGATACCTTTCTCCAAAATGGATTAAAATGTTTGTTTTGGATGAAGCAGATGA
AATGTTGAGCCGAGGGTTTAAGGATCAAATATATGAGATTTTCCAAAAATTAAATACAAGTATTCAGGTTGTGTTGCTAT
CTGCCACAATGCCAACAGATGTGTTGGAAGTGACCAAAAAGTTCATGAGAGATCCAATTCGAATTCTGGTGAAGAAGGAA
GAATTGACCCTTGAAGGAATCAAACAGTTCTATATTAATGTTGAAAGAGAGGAATGGAAGTTGGATACACTTTGTGACTT
GTACGAGACACTGACAATTACCCAGGCTGTTATTTTTCTCAATACAAGGCGCAAGGTGGACTGGCTTACTGAGAAAATGC
ATGCTAGAGACTTCACAGTTTCTGCACTGCATGGTGATATGGACCAGAAGGAAAGAGATGTTATCATGAGGGAATTCCGT
TCAGGGTCAAGCCGCGTTCTGATCACTACTGATTTGTTGGCTCGCGGGATTGATGTGCAACAAGTGTCTCTGGTTATAAA
CTATGACCTACCTACCAATCGTGAAAACTATATTCACAGAATTGGCAGAGGGGGTCGATTTGGGAGGAAAGGTGTGGCTA
TTAACTTTGTTACTGAAGAAGACAAGAGGATTCTTCGGGACATTGAGACTTTCTACAATACTACAGTGGAGGAAATGCCA
ATGAATGTGGCTGACCTTATTTAA
ATGTCTGGTGGCTCTGCGGATTACAACAGAGAACATGGCGGCCCAGAGGGAATGGACCCCGATGGTGTCATCGAGAGCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGAGCTATTATTCCCTGTATTAAAGGGTATGATGTGATTGCTCAAGCTCAGTCAGGT
ACTGGCAAGACAGCCACATTTGCTATTTCCATCCTGCAACAGTTGGAGATTGAGTTCAAGGAGACCCAAGCACTAGTATT
GGCCCCCACCAGAGAACTGGCTCAACAGATACAAAAGGTAATTCTGGCTCTTGGAGACTATATGGGAGCAACTTGTCATG
CCTGCATTGGTGGAACCAATGTTCGAAATGAAATGCAAAAATTGCAGGCAGAAGCACCACATATTGTTGTTGGTACACCG
GGCAGAGTGTTTGATATGTTGAACAGAAGATACCTTTCTCCAAAATGGATTAAAATGTTTGTTTTGGATGAAGCAGATGA
AATGTTGAGCCGAGGGTTTAAGGATCAAATATATGAGATTTTCCAAAAATTAAATACAAGTATTCAGGTTGTGTTGCTAT
CTGCCACAATGCCAACAGATGTGTTGGAAGTGACCAAAAAGTTCATGAGAGATCCAATTCGAATTCTGGTGAAGAAGGAA
GAATTGACCCTTGAAGGAATCAAACAGTTCTATATTAATGTTGAAAGAGAGGAATGGAAGTTGGATACACTTTGTGACTT
GTACGAGACACTGACAATTACCCAGGCTGTTATTTTTCTCAATACAAGGCGCAAGGTGGACTGGCTTACTGAGAAAATGC
ATGCTAGAGACTTCACAGTTTCTGCACTGCATGGTGATATGGACCAGAAGGAAAGAGATGTTATCATGAGGGAATTCCGT
TCAGGGTCAAGCCGCGTTCTGATCACTACTGATTTGTTGGCTCGCGGGATTGATGTGCAACAAGTGTCTCTGGTTATAAA
CTATGACCTACCTACCAATCGTGAAAACTATATTCACAGAATTGGCAGAGGGGGTCGATTTGGGAGGAAAGGTGTGGCTA
TTAACTTTGTTACTGAAGAAGACAAGAGGATTCTTCGGGACATTGAGACTTTCTACAATACTACAGTGGAGGAAATGCCA
ATGAATGTGGCTGACCTTATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 303 .18 RPM |
| SRP012922_cerebellum | 516 .06 RPM |
| SRP012922_heart | 255 .93 RPM |
| SRP012922_kidney | 222 .60 RPM |
| SRP012922_liver | 91 .65 RPM |
| SRP012922_lung | 268 .34 RPM |
| SRP012922_quadricep_muscle | 341 .50 RPM |
| SRP012922_spleen | 238 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014724 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000013659 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000011183 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018565 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000156976 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005867 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000011737 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007377 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003702 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006633 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005011 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010729 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000004170 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014384 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000015718 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001815 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012601 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002268 | ortholog_one2one | 11 retrogenes | |
| Takifugu rubripes | ENSTRUG00000005660 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013050 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_648 | 91.23 | 55.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_869 | 92.76 | 71.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1264 | 93.47 | 60.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2018 | 92.76 | 71.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2066 | 81.86 | 51.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011502 retrocopies