Parental gene:

CCDC59, ENSDNOG00000011546

Aliases:None
Description:coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:25005]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3036:92221..98247(-)


>ENSDNOG00000011546
CATCTGAAGGCCCATGCGGGGAGTGTCCGCGAGGGGCAAGGCTTTGCGTTTCGAAGAAAGCTGAAGATTCAGAAAAACTA
CAAGAAATTGCTGTGGAAGGCACAAAGGGCTCAAACCTCACAATCCCAGTTCGTAGATCGATACCCAGATCATCTGAAAC
ATCTCTATTTAGCTGAAGAGGAAAGACTTAGAAAGCAACTTAAAAAAGTTGACCAAACTTTGTCAGAAGAACAAGTTGAC
CAACTGTTGCCAGAACAAGGTTGCATTGACCAGGTTTTGTCTGAAGAACAATGTAGCATTGACCGGACTCTACCAGCAGA
ACAGTGTAGCAAAACAGTAAACTCCACTGCTATTTCAAAGAAAAATAAAAAGAAAACATCAAATCAAAAAGCACAAGAAG
AATATGAACAGGTACAAGCAAAGCGTGCTGCTAAGAAACAAGAATTTGAGAGAAGAAAACGAGAAAGAGAAGAATCTCAG
AGGCTGTACAAAAAGAAGAAAATGGAAATGTTCAAAATATTGAGCAAAAAAACTAAAAAGGGCCAACCAAATTTGAATTT
ACAAATGGAGTATCTTCTTCAAAAAATACAAGAAAAAAATTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 16 .72 RPM
SRP012922_cerebellum 20 .76 RPM
SRP012922_heart 8 .59 RPM
SRP012922_kidney 18 .34 RPM
SRP012922_liver 7 .90 RPM
SRP012922_lung 27 .49 RPM
SRP012922_quadricep_muscle 8 .13 RPM
SRP012922_spleen 23 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016875 ortholog_one2one 1 retrogene
retro_amel_954,
Bos taurus ENSBTAG00000036282 ortholog_one2one 4 retrogenes
retro_btau_725, retro_btau_726, retro_btau_727, retro_btau_728,
Choloepus hoffmanni ENSCHOG00000007788 ortholog_one2one 1 retrogene
retro_chof_1648,
Dipodomys ordii ENSDORG00000003005 ortholog_one2one 1 retrogene
retro_dord_485,
Echinops telfairi ENSETEG00000000256 ortholog_one2one 2 retrogenes
retro_etel_1338, retro_etel_1789,
Gorilla gorilla ENSGGOG00000025296 ortholog_one2many 2 retrogenes
retro_ggor_1386, retro_ggor_99,
Microcebus murinus ENSMICG00000000967 ortholog_one2one 4 retrogenes
retro_mmur_1456, retro_mmur_354, retro_mmur_689, retro_mmur_909,
Oryctolagus cuniculus ENSOCUG00000017824 ortholog_one2one 2 retrogenes
retro_ocun_1782, retro_ocun_498,
Otolemur garnettii ENSOGAG00000004383 ortholog_one2one 1 retrogene
retro_ogar_2065,
Pan troglodytes ENSPTRG00000005266 ortholog_one2one 1 retrogene
retro_ptro_1270,
Tupaia belangeri ENSTBEG00000008887 ortholog_one2one 7 retrogenes
retro_tbel_1515, retro_tbel_2047, retro_tbel_2126, retro_tbel_302, retro_tbel_3391, retro_tbel_3721, retro_tbel_972,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1033 55.56 53.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000011546 retrocopies