Parental gene:

CCDC59, ENSTBEG00000008887

Aliases:None
Description:coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:25005]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2357:82316..88179(-)


>ENSTBEG00000008887
ATGGCGCCGACTAGGCCAGTGGCGAGGCGGCGGACTGGGAGTTTGGGGACCGGGGGCGAAGGGGCTTCTCTGGTAGGATT
CAGAAGTAAGAAGGTGAAACAGAGGACGTGGCGGCCTAACGGTCTGCAAGCCCGCGTGGGTAGCATTCGCGAGGGACAAG
GCTTTGCATTTCGAAGAAAACTTAAGATTCAGCAAAGTTACAGGAAATTATTACGGAAGGAAAAGAAGGCTCAAACATCA
CAGGACTCCCAATTCACAGATCAATACCCAGATCATCTGAAACATCTCTATTTAGCTGAAGAGGAAAGACTCAAGAAGCA
ACTAAGAAAAATTGACAAGCCTTTGTTAGAAGAAGTTGATCGACTTTTGCCTGAAGAACAATGTAGCACTGACCAGGCTT
GGTCTAAAGATCAGTGTAGTACTCACCAGCCTCAGCCAGAAGAACAGTGTAGCCAACCAGTAAATTCCATTACAATTCCA
AAGAAAAATAAAAAGAAAACTTCAAATCAGAAAGCACAAGAAGAATATGAACAGGTACAAGCTAAGCGTGCTGCCAAGAA
ACAAGAATTTGAGAGAAGAAAACAAGAGAGAGAAGAAGCTCAAAAGCTCTACAAAAAAAAGAAAATGGAAGTATTTAAAA
TATTGAGCAAAAAGACTAAAAAGGGCCAACCAAACTTGAATTTACAAATGGAATATCTTCTTCAAAAAATACAAGAAAAA
AAATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016875 ortholog_one2one 1 retrogene
retro_amel_954,
Bos taurus ENSBTAG00000036282 ortholog_one2one 4 retrogenes
retro_btau_725, retro_btau_726, retro_btau_727, retro_btau_728,
Choloepus hoffmanni ENSCHOG00000007788 ortholog_one2one 1 retrogene
retro_chof_1648,
Dasypus novemcinctus ENSDNOG00000011546 ortholog_one2one 1 retrogene
retro_dnov_1033,
Dipodomys ordii ENSDORG00000003005 ortholog_one2one 1 retrogene
retro_dord_485,
Echinops telfairi ENSETEG00000000256 ortholog_one2one 2 retrogenes
retro_etel_1338, retro_etel_1789,
Gorilla gorilla ENSGGOG00000025296 ortholog_one2many 2 retrogenes
retro_ggor_1386, retro_ggor_99,
Microcebus murinus ENSMICG00000000967 ortholog_one2one 4 retrogenes
retro_mmur_1456, retro_mmur_354, retro_mmur_689, retro_mmur_909,
Oryctolagus cuniculus ENSOCUG00000017824 ortholog_one2one 2 retrogenes
retro_ocun_1782, retro_ocun_498,
Otolemur garnettii ENSOGAG00000004383 ortholog_one2one 1 retrogene
retro_ogar_2065,
Pan troglodytes ENSPTRG00000005266 ortholog_one2one 1 retrogene
retro_ptro_1270,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_302 69.64 68.88
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2. retro_tbel_972 72.82 84.65
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3. retro_tbel_1515 65.25 96.27
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4. retro_tbel_2047 68.86 68.46
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5. retro_tbel_2126 80.33 74.69
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6. retro_tbel_3391 95.79 78.84
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7. retro_tbel_3721 85.78 95.44
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Download FASTA sequences of all ENSTBEG00000008887 retrocopies