Parental gene:

CCDC59, ENSETEG00000000256

Aliases:None
Description:coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:25005]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_3645:40972..45309(-)


>ENSETEG00000000256
ATGGCGCCGGTAAAGCTAAGCTCCAGCCGGCGCGCCGAGAGCCTGGGTTTGCGTGGCGAAGCGGCTTCTCCAGTCGAAGT
CAAGAACAGGGACGTGAAACAGAGAAGGTGGAGATTTAATCATCCGAAGGCTTTTGTAGGGAGCGTCCATGAGGGGCAAG
GCTTTGCACTTAGAAGAAAGCTAAAGATTCAACAAAGTTACAAGAAATTGCTTTGGAAGGAAAGAAAGTTTCAAACCTCA
CGGGAATCCCAGTTCACAGATCGATACCCAGACCACCTGAAACATCTCTATTTAGCTGAAAAGGAAAGGCTCAAGAAGCA
AAACAGAAAAGTTCCCCAGCCTTTGCCAGAAGTACAAGTTGCACAACCTTTGCCAGAAGAGCGCGCCAGCCTTGACCAGG
CTGTGTCTCAGGAACCGTGCAGCCTGGATCATCCTCTGCCAGAAGAACAATGTAGCACAACAGTAAACTCCTTTGCTACC
CGAATGAAAAAGAAAAAGAAAACATCCAATCAGAAAGCACAGGAAGAATATTCACAGATCCAAGCCAAACGTGCTGCTAA
GAAACAGGAATTTGAGCGGAGGAAACAGGAACGAGAAGAAGCTCAAAGACTCTACAAAAAGAAGAAAATGGAAGTGTTCA
AAATATTAAGCAAAAAGACTAAAAAGGGTCAACCAAATTTGAATATACAAATGGAATATCTTCTTCAAAAAATACAAGCA
GGAAATTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016875 ortholog_one2one 1 retrogene
retro_amel_954,
Bos taurus ENSBTAG00000036282 ortholog_one2one 4 retrogenes
retro_btau_725, retro_btau_726, retro_btau_727, retro_btau_728,
Choloepus hoffmanni ENSCHOG00000007788 ortholog_one2one 1 retrogene
retro_chof_1648,
Dasypus novemcinctus ENSDNOG00000011546 ortholog_one2one 1 retrogene
retro_dnov_1033,
Dipodomys ordii ENSDORG00000003005 ortholog_one2one 1 retrogene
retro_dord_485,
Gorilla gorilla ENSGGOG00000025296 ortholog_one2many 2 retrogenes
retro_ggor_1386, retro_ggor_99,
Microcebus murinus ENSMICG00000000967 ortholog_one2one 4 retrogenes
retro_mmur_1456, retro_mmur_354, retro_mmur_689, retro_mmur_909,
Oryctolagus cuniculus ENSOCUG00000017824 ortholog_one2one 2 retrogenes
retro_ocun_1782, retro_ocun_498,
Otolemur garnettii ENSOGAG00000004383 ortholog_one2one 1 retrogene
retro_ogar_2065,
Pan troglodytes ENSPTRG00000005266 ortholog_one2one 1 retrogene
retro_ptro_1270,
Tupaia belangeri ENSTBEG00000008887 ortholog_one2one 7 retrogenes
retro_tbel_1515, retro_tbel_2047, retro_tbel_2126, retro_tbel_302, retro_tbel_3391, retro_tbel_3721, retro_tbel_972,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_1338 58.92 96.28
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2. retro_etel_1789 66.29 72.31
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Download FASTA sequences of all ENSETEG00000000256 retrocopies