Parental gene:

POLR3D, ENSDNOG00000013488

Aliases:None
Description:polymerase (RNA) III (DNA directed) polypeptide D, 44kDa [Source:HGNC Symbol;Acc:1080]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_16730:4755..9378(-)


>ENSDNOG00000013488
ATGTCGGAAAGAAACGCCGCGGGCGAGCCCAGCGCCCCGAGAGGGCCCCGACCCCTTCTCCCCGGGGCCCGGGGGCTCAT
TGAGAGGCGGCCGGCTCCCCCCCTCACTCCGGGCCGCCTTCCCTCCATCCGTTCCAGGGACCTCACTCTCGGGGGAGTCA
AGAAGAAAACCTTCACACCAAACATCATCAGTCGGAAGATTAAGGAAGAGCCCAAGGAAGACATGACCGTCAAGAAGGAG
AAGCGTGAAAGGGATAGAGACCGGCAGCGCGAAGGGCATGGGCGGGGAAGGGGTCGTCCGGAAGTGATCCAGTCCCACTC
CATCTTTGAGCAGGGCCCAGCAGAGATGATGAAGAAAAAAGGGAACTGGGATAAGACAGTGGATATGTCAGACATGGGGC
CCTCTCATATTATCAACATCAAAAAAGAGAAGAGGGAGACAGATGAAGAAACCAAACAGATCCTGCGCATGCTGGAGAAG
GATGACTTCATCGATGACCCCGGGCTGAGGAATGACATGAGAAACATGCCTGTGCAGCTGCCTCTGGCTTACTCGGGGTG
GCTTTTTAAGGAAGAGAGCGAGGAACCAGATGTTAAGCCTTGGCCAGCTGGCCCCAAGGAAGAGGACATGGAAGTGGATA
CCCCTGTCACGAAAGTGAAAGAGGAGCCACGCGATGAGGAGGAGGAAGCCAAAGCGAAGGCTCCTCCCAGAGCAGCCAGG
AAGACCCCAGGCCTCCCAAAGGAAGTATCTGTGGCGGAGCTGCTCAGGGAGTTGAGCCTCACCAAGGAGGAAGAGCTGCT
GTTCCTGCAGCTGCCAGACACCCTCCCTGGCCAGCCGCCCACTCAAGACGTCAAGCCAATCAAGACAGAGGTGCAGGGCG
AGGATGGACAGGTGGTGGTTATGAAGCAGGAGAAGGACCGGGAGGCCAGGCTGGCAGAGAATACGTGTACCCTGGGTGAC
CTGACGGAGGGCCAGGTGGGCAAACTGCTCATCCGCAGGTCAGGCAAGGTGCAGCTCCTCCTGGGCAGGGTGACTCTGGA
TGTGACGATGGGGACTTCCTGCTCTTTCCTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTAGGACGGGTGAGATGA
CCGTCCTGGGACACGTGAAACACAAACTCGTATGTTCTCCTGATTTTGAATCCCTCTTGGATCACAAACACCGGTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 17 .50 RPM
SRP012922_cerebellum 29 .83 RPM
SRP012922_heart 9 .51 RPM
SRP012922_kidney 12 .32 RPM
SRP012922_liver 13 .00 RPM
SRP012922_lung 28 .41 RPM
SRP012922_quadricep_muscle 17 .48 RPM
SRP012922_spleen 23 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000025090 ortholog_one2many 1 retrogene
retro_ecab_43,
Erinaceus europaeus ENSEEUG00000007632 ortholog_one2one 2 retrogenes
retro_eeur_277, retro_eeur_705,
Homo sapiens ENSG00000168495 ortholog_one2one 1 retrogene
retro_hsap_596,
Macropus eugenii ENSMEUG00000000465 ortholog_one2one 1 retrogene
retro_meug_1550,
Myotis lucifugus ENSMLUG00000002109 ortholog_one2one 1 retrogene
retro_mluc_2339,
Macaca mulatta ENSMMUG00000023226 ortholog_one2one 1 retrogene
retro_mmul_2449,
Monodelphis domestica ENSMODG00000009491 ortholog_one2one 1 retrogene
retro_mdom_988,
Nomascus leucogenys ENSNLEG00000015502 ortholog_one2one 1 retrogene
retro_nleu_2218,
Pongo abelii ENSPPYG00000018419 ortholog_one2one 1 retrogene
retro_pabe_594,
Pan troglodytes ENSPTRG00000020056 ortholog_one2one 1 retrogene
retro_ptro_439,
Tursiops truncatus ENSTTRG00000012745 ortholog_one2one 1 retrogene
retro_ttru_1189,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1681 64.45 62.81
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Download FASTA sequences of all ENSDNOG00000013488 retrocopies