Parental gene:

ENSECAG00000025090

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:2:51127218..51131583(+)


>ENSECAG00000025090
CCGGGAGGGCCCCGACCTCTCCTCTCGGGGGCCCGGGGGCTCATCGGACGGCGGCCGGCGCCTCCCCTCACGCCGGGCCG
CCTTCCCTCCATCCGCTCCAGGGACCTCACCCTCGGGGGAGTCAAGAAGAAAACCTTCACCCCAAACATCATCAGTCGGA
AGATCAAGGAAGAGCCCAAGGAAGAAGTAACCATCAAGAAGGAGAAGCGTGAAAGGGATAGAGACCGACAGCGAGAGGGG
CATGGGCGGGGCCGGGGTCGCCCAGAAGTGATCCAGTCCCACTCCATCTTTGAGCAGGGCCCAGCTGAAATGATGAAGAA
AAAGGGGAACTGGGATAAGACAGTGGATGTCTCGGACATTGGGCCCTCTCACATCATCAACATCAAAAAAGAGAAGAGGG
AGACAGATGAAGAAACAAAACAGATCTTGCGCATGCTGGAGAAGGATGATTTCATCGATGACCCTGGGCTGAGGAATGAC
ACTCGAAACATGCCTGTGCAGCTGCCGCTGGCTCACTCAGGGTGGCTTTTTAAAGAAGAGAGTGAAGAACCGGATGTTAA
GCCTTCGTTGGCTGGCCCCAAGGAGGAGGACATGGAGGTGGATGTGCCTGTTGTGAAAGTGAAAGAGGAGCCACGAGATG
AGGAGGAGGAGGCCAAGGTGAAGGCTCCTCCCAGAGCAGCCAGGAAGACCCCAGGCCTCCCGAAGGATGTCTCTGTGGCA
GAGCTACTCAGGGAGCTGAGCCTCGCCCAGGAGGAAGAGCTGCTCTTCCTCCAGCTGCCGGACACGCTCCCTGGCCAGCC
ACCTACTCAGGACATCAAGCCTATCAAGACAGAGGTGCAGAGCGAGGATGGACAGATGGTGGTTATAAAGCAGGAGAAAG
ACCGGGAAGCCAGGCTGGCGGAGAATGCTTGTACCCTGGCTGACCTGACAGAGGGCCAGGTTGGCAAGTTGCTCATCCGC
AGGTCGGGGAAGGTGCAGCTCCTCCTGGGCAAGGTGACTCTGGATGTGACCGTGGGGACCGCCTGCTCTTTCCTGCAGGA
GCTGGTGTCTGTGGGCCTTGGAGACAGTAGGACGGGTGAAATGACAGTCCTGGGACATGTAAAGCACAAACTTGTGTGTT
CCCCCGATTTTGAATCCCTCTTGGATCACAAACACCGGTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 17 .24 RPM
SRP021940_embryo 25 .39 RPM
SRP021940_cerebellum 9 .09 RPM
SRP021940_testis 18 .03 RPM
SRP021940_placental_villous 15 .83 RPM
SRP021940_articular_cartilage 10 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013488 ortholog_one2many 1 retrogene
retro_dnov_1681,
Erinaceus europaeus ENSEEUG00000007632 ortholog_one2many 2 retrogenes
retro_eeur_277, retro_eeur_705,
Homo sapiens ENSG00000168495 ortholog_one2many 1 retrogene
retro_hsap_596,
Macropus eugenii ENSMEUG00000000465 ortholog_one2many 1 retrogene
retro_meug_1550,
Myotis lucifugus ENSMLUG00000002109 ortholog_one2many 1 retrogene
retro_mluc_2339,
Macaca mulatta ENSMMUG00000023226 ortholog_one2many 1 retrogene
retro_mmul_2449,
Monodelphis domestica ENSMODG00000009491 ortholog_one2many 1 retrogene
retro_mdom_988,
Nomascus leucogenys ENSNLEG00000015502 ortholog_one2many 1 retrogene
retro_nleu_2218,
Pongo abelii ENSPPYG00000018419 ortholog_one2many 1 retrogene
retro_pabe_594,
Pan troglodytes ENSPTRG00000020056 ortholog_one2many 1 retrogene
retro_ptro_439,
Tursiops truncatus ENSTTRG00000012745 ortholog_one2many 1 retrogene
retro_ttru_1189,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_43 92.23 100.00
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Download FASTA sequences of all ENSECAG00000025090 retrocopies