Parental gene:

RNF13, ENSDNOG00000014687

Aliases:None
Description:ring finger protein 13 [Source:HGNC Symbol;Acc:10057]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_7243:92824..251507(+)


>ENSDNOG00000014687
ATGCTGCTCTCCATAGGAATGCTCATGCTGTCGGCCACACAAGTCTACACCATCTTGACTGTCCAGTTCTTCGCATTTTT
AAACCTACTGCCTGTAGAAGCAGACATTTTAGCATATAATTTTGAAAATGCATCTCAGACATTTGATGATCTTCCTGCAA
GATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTCTGATTAACTCAAAACCAGAGAATGCCTGTGAACCTATA
GTGCCTCCACCACTAAAAGATAATTCATCAGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGCAATTTTGATATAAA
GGTTTTAAATGCACAGAGAGCGGGATTCAAGGCAGCCATAGTTCACAATGTCGATTCTGATGAACTCATTAGCATGGGAT
CCAACGACATTGATGTTTTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCCCTGAAAGAT
GAATTCATATATGAAAAAGGGGGCCACATTATTTTAGTTCCGGAATTTAGTCTTCCTCTGGAATACTACCTCATCCCCTT
CATCATTGTGAGCATCTGTCTCATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGACAGACACAGAGCTAGAA
GAAACAGACTTCGTAAAGATCAACTTAAGAAACTCCCTATACATAAGTTCAAGAAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATCACTGCAAGTGTGTAGA
CCCTTGGCTAACTAAAACGAAAAAAACCTGTCCAGTCTGCAAGCAAAAAGTTGTTCCTTCTCAAGGTGATTCAGACTCTG
ACACAGATAGTAGTCAAGAAGAAAATGAAGTGTCAGAACATACCCCTTTACTTAGACCTTTGGCTTCTGTCAGCACCCAG
TCATTTGGTGCTTTGTCAGAATCGCACTCACATCAGAACATGACAGAATCTTCAGACTATGAAGAAGAGGACAATGAAGA
CACTGACAGTAGTGATGCAGAAAATGAAATTAATGAACACAGTGTCGTGGTCCAGTTGCAGCCTAATGGTGAACGGGATT
TCAACATAGCAAATACTGTTTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 26 .84 RPM
SRP012922_cerebellum 30 .24 RPM
SRP012922_heart 12 .99 RPM
SRP012922_kidney 26 .56 RPM
SRP012922_liver 45 .36 RPM
SRP012922_lung 79 .72 RPM
SRP012922_quadricep_muscle 9 .69 RPM
SRP012922_spleen 79 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010433 ortholog_one2one 1 retrogene
retro_amel_311,
Canis familiaris ENSCAFG00000008370 ortholog_one2one 1 retrogene
retro_cfam_815,
Dasypus novemcinctus ENSDNOG00000011956 other_paralog 3 retrogenes
retro_dnov_2168, retro_dnov_534, retro_dnov_580,
Microcebus murinus ENSMICG00000001221 ortholog_one2one 1 retrogene
retro_mmur_323,
Nomascus leucogenys ENSNLEG00000003149 ortholog_one2one 1 retrogene
retro_nleu_627,
Pongo abelii ENSPPYG00000014202 ortholog_one2one 1 retrogene
retro_pabe_2392,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_139 90.74 56.58
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Download FASTA sequences of all ENSDNOG00000014687 retrocopies