Parental gene: | PCBD2, ENSDNOG00000019125 |
| Aliases: | None |
| Description: | pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:HGNC Symbol;Acc:24474] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_7512:65848..151340(+) |
>ENSDNOG00000019125
GCGGCCGCGCTGCGGGCGCGTGGGGCGACGCTGCGCCTGTTCGGGGCGCTGCGGCGCGAGGACACAAGACTTGCGGCCAT
GTCAGCAGATGCTCACTGGTTGACAGCAGAGGAGAGGAACCAAGTCATACTTGACCTTAAAGCAGCAGGATGGTCGGAAT
TAAGTGAGAGAAATGCCATTTACAAAGAATTCTCATTTAAAAATTTTAATCAGGCATTTGGCTTTATGTCCCGAGTTGCC
TTACAAGCAGAGAAGATGAATCATCACCCAGAATGGTTCAATGTATACAACAAGGTCCAGATAACTGTCACCTCACACAA
CTGCGGTGGACTGACCAAAAGGGATGTGACACTGGCCCAGTTTATTGAAAAAGCAGCTTCTCTATGA
GCGGCCGCGCTGCGGGCGCGTGGGGCGACGCTGCGCCTGTTCGGGGCGCTGCGGCGCGAGGACACAAGACTTGCGGCCAT
GTCAGCAGATGCTCACTGGTTGACAGCAGAGGAGAGGAACCAAGTCATACTTGACCTTAAAGCAGCAGGATGGTCGGAAT
TAAGTGAGAGAAATGCCATTTACAAAGAATTCTCATTTAAAAATTTTAATCAGGCATTTGGCTTTATGTCCCGAGTTGCC
TTACAAGCAGAGAAGATGAATCATCACCCAGAATGGTTCAATGTATACAACAAGGTCCAGATAACTGTCACCTCACACAA
CTGCGGTGGACTGACCAAAAGGGATGTGACACTGGCCCAGTTTATTGAAAAAGCAGCTTCTCTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 5 .64 RPM |
| SRP012922_cerebellum | 3 .71 RPM |
| SRP012922_heart | 2 .78 RPM |
| SRP012922_kidney | 4 .65 RPM |
| SRP012922_liver | 4 .02 RPM |
| SRP012922_lung | 8 .25 RPM |
| SRP012922_quadricep_muscle | 8 .31 RPM |
| SRP012922_spleen | 6 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000015810 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000007051 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016658 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000003784 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012638 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014351 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000000384 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016874 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_645 | 76.77 | 75.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_660 | 55.56 | 76.56 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000019125 retrocopies