Parental gene: | AAED1, ENSDNOG00000024562 |
| Aliases: | None |
| Description: | AhpC/TSA antioxidant enzyme domain containing 1 [Source:HGNC Symbol;Acc:16881] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4680:26001..74003(-) |
>ENSDNOG00000024562
GACGCCCGCGGGGAGGGGGGGCAGGCCCGCGCGCGGCTCGGGGCGCACCGGGTCCCTCGGGGGCTCGGGCGGCATTTCCT
GTGTTATATTTGCAAGGAATACGTAGAAGATCTGGCCAAGATCCCCAAGAGTTCTTTACAAGAAGCAGATGTCACCCTTA
TAGTGATTGGACAATCGTCCTACCATCATATTGAGTCTTTCTGCAAACTGACTGGGTATTCTTATGAAATCTATGTTGAT
CCTGAGAGAGAAATTTATAAAAGACTGGGAATGAAAAGAGGTGAAGAAATTGCTGCCTCAGGACAGAGCCCCCATGTAAA
GTCAAACATACTTTCAGGAAGCATTCGGAGCCTGTGGAGGGCAGTGACTGGCCCTCTTTTTGATTTTCAAGGAGACCCCG
CTCAGCAAGGCGGAACCCTCATTTTAGGTCCAAACATTCATTTTATACACCATGATAGGAATCGATTGGATCACAACCCC
AACAATTCTGTCCTACAGCATGTAGGAGTTCATGTGAGCTTTACAAGCAGGCTTTCAGTTGTCCATTTGTTA
GACGCCCGCGGGGAGGGGGGGCAGGCCCGCGCGCGGCTCGGGGCGCACCGGGTCCCTCGGGGGCTCGGGCGGCATTTCCT
GTGTTATATTTGCAAGGAATACGTAGAAGATCTGGCCAAGATCCCCAAGAGTTCTTTACAAGAAGCAGATGTCACCCTTA
TAGTGATTGGACAATCGTCCTACCATCATATTGAGTCTTTCTGCAAACTGACTGGGTATTCTTATGAAATCTATGTTGAT
CCTGAGAGAGAAATTTATAAAAGACTGGGAATGAAAAGAGGTGAAGAAATTGCTGCCTCAGGACAGAGCCCCCATGTAAA
GTCAAACATACTTTCAGGAAGCATTCGGAGCCTGTGGAGGGCAGTGACTGGCCCTCTTTTTGATTTTCAAGGAGACCCCG
CTCAGCAAGGCGGAACCCTCATTTTAGGTCCAAACATTCATTTTATACACCATGATAGGAATCGATTGGATCACAACCCC
AACAATTCTGTCCTACAGCATGTAGGAGTTCATGTGAGCTTTACAAGCAGGCTTTCAGTTGTCCATTTGTTA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 8 .36 RPM |
| SRP012922_cerebellum | 5 .09 RPM |
| SRP012922_heart | 6 .03 RPM |
| SRP012922_kidney | 7 .12 RPM |
| SRP012922_liver | 7 .12 RPM |
| SRP012922_lung | 12 .52 RPM |
| SRP012922_quadricep_muscle | 6 .58 RPM |
| SRP012922_spleen | 13 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006422 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007723 | ortholog_one2many | 7 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005509 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000158122 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008295 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017058 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000003177 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019418 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021156 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1226 | 64.66 | 69.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1419 | 76.60 | 51.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1519 | 70.09 | 61.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1871 | 72.17 | 59.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000024562 retrocopies