Parental gene:

SSR4, ENSDNOG00000025714

Aliases:None
Description:signal sequence receptor, delta [Source:HGNC Symbol;Acc:11326]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_91251:223..3960(+)


>ENSDNOG00000025714
ATGGCGGCGGTGGCGTCGCTCGGGGCCCTGGCACTGCTCCTGCTGTCCAGCCTTTCCTGCTGCTCAGCTGAGGCCTGCAT
GGAGCCCCAGATCACCCCTTCCTATTACACCACCTCAGATGCCGTCATCTCCACCGAGACTGTCTTTATTGTGGAGATCT
CCCTGACGTGCAAGAACAGGGTCCAGAATATGGTTCTTTATGCTGACGTCGGTGGGAAACAATTTCCTGTCACCCGGGGC
CAGGATGTCGGGCGCTATCAGGTGTCCTGGAGCCTGGACCATAAGAGCGCCCACGCGGGCACCTACGAGGTGCGCTTCTT
CGACGAGGAATCCTACAGCCTCCTGCGGAAGGCTCAGAGAAATAACGAGGACGTCTCCGTCATCCCTCCCCTGTTCACAG
TCAGCGTGGACCATCGGGGCACGTGGAATGGACCCTGGGTCTCCACCGAGGTGCTGGCGGCCGTCATCGGCCTGGTCATC
TACTACCTGGCCTTCAGCGCCAAGAGCCACATCCAGGCCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 318 .73 RPM
SRP012922_cerebellum 87 .43 RPM
SRP012922_heart 89 .10 RPM
SRP012922_kidney 223 .96 RPM
SRP012922_liver 208 .52 RPM
SRP012922_lung 213 .81 RPM
SRP012922_quadricep_muscle 84 .64 RPM
SRP012922_spleen 293 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011328 ortholog_one2one 1 retrogene
retro_acar_97,
Callithrix jacchus ENSCJAG00000011167 ortholog_one2one 1 retrogene
retro_cjac_2056,
Homo sapiens ENSG00000180879 ortholog_one2one 1 retrogene
retro_hsap_2536,
Gorilla gorilla ENSGGOG00000024329 ortholog_one2one 1 retrogene
retro_ggor_1585,
Loxodonta africana ENSLAFG00000006908 ortholog_one2one 1 retrogene
retro_lafr_337,
Mustela putorius furo ENSMPUG00000008803 ortholog_one2many 1 retrogene
retro_mputfur_148,
Nomascus leucogenys ENSNLEG00000013602 ortholog_one2one 1 retrogene
retro_nleu_2738,
Otolemur garnettii ENSOGAG00000006738 ortholog_one2one 1 retrogene
retro_ogar_691,
Procavia capensis ENSPCAG00000009037 ortholog_one2one 1 retrogene
retro_pcap_139,
Sus scrofa ENSSSCG00000012784 ortholog_one2one 1 retrogene
retro_sscr_866,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_922 71.43 67.63
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2. retro_dnov_1204 82.86 100.00
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Download FASTA sequences of all ENSDNOG00000025714 retrocopies