Parental gene:

SSR4, ENSG00000180879

Aliases:SSR4, TRAPD
Description:signal sequence receptor, delta [Source:HGNC Symbol;Acc:11326]
Organism:Human (Homo sapiens)
Coordinates:X:153058970..153063960(+)


>ENSG00000180879
ATGGCGGCGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGCTGCTCAGCCGAGGCCTGCCT
GGAGCCCCAGATCACCCCTTCCTACTACACCACTTCTGACGCTGTCATTTCCACTGAGACCGTCTTCATTGTGGAGATCT
CCCTGACATGCAAGAACAGGGTCCAGAACATGGCTCTCTATGCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGAGGC
CAGGATGTGGGGCGTTATCAGGTGTCCTGGAGCCTGGACCACAAGAGCGCCCACGCAGGCACCTATGAGGTTAGATTCTT
CGACGAGGAGTCCTACAGCCTCCTCAGGAAGGCTCAGAGGAATAACGAGGACATTTCCATCATCCCGCCTCTGTTTACAG
TCAGCGTGGACCATCGGGGCACTTGGAACGGGCCCTGGGTGTCCACTGAGGTGCTGGCTGCGGCGATCGGCCTTGTGATC
TACTACTTGGCCTTCAGTGCGAAGAGCCACATCCAGGCCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 45 .40 RPM
bodymap2_adrenal 98 .29 RPM
bodymap2_brain 16 .55 RPM
bodymap2_breast 39 .67 RPM
bodymap2_colon 44 .26 RPM
bodymap2_heart 18 .66 RPM
bodymap2_kidney 47 .61 RPM
bodymap2_liver 101 .63 RPM
bodymap2_lung 91 .63 RPM
bodymap2_lymph_node 183 .83 RPM
bodymap2_ovary 39 .79 RPM
bodymap2_prostate 57 .04 RPM
bodymap2_skeletal_muscle 18 .24 RPM
bodymap2_testis 62 .86 RPM
bodymap2_thyroid 49 .32 RPM
bodymap2_white_blood_cells 63 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011328 ortholog_one2one 1 retrogene
retro_acar_97,
Callithrix jacchus ENSCJAG00000011167 ortholog_one2one 1 retrogene
retro_cjac_2056,
Dasypus novemcinctus ENSDNOG00000025714 ortholog_one2one 2 retrogenes
retro_dnov_1204, retro_dnov_922,
Gorilla gorilla ENSGGOG00000024329 ortholog_one2one 1 retrogene
retro_ggor_1585,
Loxodonta africana ENSLAFG00000006908 ortholog_one2one 1 retrogene
retro_lafr_337,
Mustela putorius furo ENSMPUG00000008803 ortholog_one2many 1 retrogene
retro_mputfur_148,
Nomascus leucogenys ENSNLEG00000013602 ortholog_one2one 1 retrogene
retro_nleu_2738,
Otolemur garnettii ENSOGAG00000006738 ortholog_one2one 1 retrogene
retro_ogar_691,
Procavia capensis ENSPCAG00000009037 ortholog_one2one 1 retrogene
retro_pcap_139,
Sus scrofa ENSSSCG00000012784 ortholog_one2one 1 retrogene
retro_sscr_866,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2536 51.03 82.08
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Download FASTA sequences of all ENSG00000180879 retrocopies